Mei Giampiero, Di Venere Almerinda, Nicolai Eleonora, Angelucci Clotilde B, Ivanov Igor, Sabatucci Annalaura, Dainese Enrico, Kuhn Hartmut, Maccarrone Mauro
NAST Centre, Nanoscienze & Nanotecnologie & Strumentazione, 00133 Rome, Italy.
Biochemistry. 2008 Sep 2;47(35):9234-42. doi: 10.1021/bi800638v. Epub 2008 Aug 12.
Lipoxygenases form a heterogeneous family of lipid peroxidizing enzymes, which have been implicated in the synthesis of inflammatory mediators, in cell development and in the pathogenesis of various diseases with major health and political relevance (atherosclerosis, osteoporosis). The crystal structures of various lipoxygenase-isoforms have been reported, and X-ray coordinates for enzyme-ligand complexes are also available. Although the 3D-structures of plant and animal lipoxygenase-isoforms are very similar, recent small-angle X-ray scattering data suggested a higher degree of motional flexibility of mammalian isozymes in aqueous solutions. To explore the molecular basis for these differences we performed dynamic fluorescence measurements that allowed us to study temperature-induced conformational changes arising from three-dimensional fluctuations of the protein matrix. For this purpose, we first investigated the impact of elevated temperature on activity, secondary structure, tertiary structure dynamics and conformational alterations. Applying fluorescence resonance energy transfer we also tested the membrane binding properties of the two lipoxygenase-isoforms, and compared their binding parameters. Taken together, our results indicate that the rabbit 12/15-lipoxygenase is more susceptible to temperature-induced structural alterations than the soybean enzyme. Moreover, the rabbit enzyme exhibits a higher degree of conformational flexibility of the entire protein molecule (global flexibility) and offers the possibility of augmented substrate movement at the catalytic center (local flexibility).
脂氧合酶构成了一个脂质过氧化酶的异质家族,它们与炎症介质的合成、细胞发育以及各种具有重大健康和政治意义的疾病(动脉粥样硬化、骨质疏松症)的发病机制有关。已经报道了各种脂氧合酶同工型的晶体结构,并且酶-配体复合物的X射线坐标也已可得。尽管植物和动物脂氧合酶同工型的三维结构非常相似,但最近的小角X射线散射数据表明,哺乳动物同工酶在水溶液中的运动灵活性更高。为了探究这些差异的分子基础,我们进行了动态荧光测量,这使我们能够研究由蛋白质基质的三维波动引起的温度诱导的构象变化。为此,我们首先研究了温度升高对活性、二级结构、三级结构动力学和构象改变的影响。应用荧光共振能量转移,我们还测试了两种脂氧合酶同工型的膜结合特性,并比较了它们的结合参数。综上所述,我们的结果表明,兔12/15-脂氧合酶比大豆酶更容易受到温度诱导的结构改变的影响。此外,兔酶在整个蛋白质分子中表现出更高程度的构象灵活性(全局灵活性),并且在催化中心提供了增强底物运动的可能性(局部灵活性)。