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MIFlowCyt:流式细胞术实验的最小信息。

MIFlowCyt: the minimum information about a Flow Cytometry Experiment.

作者信息

Lee Jamie A, Spidlen Josef, Boyce Keith, Cai Jennifer, Crosbie Nicholas, Dalphin Mark, Furlong Jeff, Gasparetto Maura, Goldberg Michael, Goralczyk Elizabeth M, Hyun Bill, Jansen Kirstin, Kollmann Tobias, Kong Megan, Leif Robert, McWeeney Shannon, Moloshok Thomas D, Moore Wayne, Nolan Garry, Nolan John, Nikolich-Zugich Janko, Parrish David, Purcell Barclay, Qian Yu, Selvaraj Biruntha, Smith Clayton, Tchuvatkina Olga, Wertheimer Anne, Wilkinson Peter, Wilson Christopher, Wood James, Zigon Robert, Scheuermann Richard H, Brinkman Ryan R

机构信息

Department of Pathology, University of Texas Southwestern Medical Center, Dallas, Texas 75390, USA.

出版信息

Cytometry A. 2008 Oct;73(10):926-30. doi: 10.1002/cyto.a.20623.

Abstract

A fundamental tenet of scientific research is that published results are open to independent validation and refutation. Minimum data standards aid data providers, users, and publishers by providing a specification of what is required to unambiguously interpret experimental findings. Here, we present the Minimum Information about a Flow Cytometry Experiment (MIFlowCyt) standard, stating the minimum information required to report flow cytometry (FCM) experiments. We brought together a cross-disciplinary international collaborative group of bioinformaticians, computational statisticians, software developers, instrument manufacturers, and clinical and basic research scientists to develop the standard. The standard was subsequently vetted by the International Society for Advancement of Cytometry (ISAC) Data Standards Task Force, Standards Committee, membership, and Council. The MIFlowCyt standard includes recommendations about descriptions of the specimens and reagents included in the FCM experiment, the configuration of the instrument used to perform the assays, and the data processing approaches used to interpret the primary output data. MIFlowCyt has been adopted as a standard by ISAC, representing the FCM scientific community including scientists as well as software and hardware manufacturers. Adoptionof MIFlowCyt by the scientific and publishing communities will facilitate third-party understanding and reuse of FCM data.

摘要

科学研究的一个基本原则是,已发表的研究结果应接受独立验证和反驳。最低数据标准通过规定明确解释实验结果所需的内容,帮助数据提供者、使用者和出版者。在此,我们提出流式细胞术实验最低信息要求(MIFlowCyt)标准,阐述报告流式细胞术(FCM)实验所需的最低信息。我们召集了一个跨学科的国际合作团队,成员包括生物信息学家、计算统计学家、软件开发人员、仪器制造商以及临床和基础研究科学家,共同制定该标准。该标准随后由国际细胞计量学促进会(ISAC)数据标准特别工作组、标准委员会、成员和理事会进行审核。MIFlowCyt标准包括有关FCM实验中所包含标本和试剂的描述、用于进行检测的仪器配置以及用于解释主要输出数据的数据处理方法的建议。MIFlowCyt已被ISAC采纳为标准,代表了包括科学家以及软件和硬件制造商在内的FCM科学界。科学界和出版界采用MIFlowCyt将有助于第三方理解和重用FCM数据。

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