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一种用于高通量和高内涵筛选的快速、全自动细胞分割算法。

A fast, fully automated cell segmentation algorithm for high-throughput and high-content screening.

作者信息

Fenistein D, Lenseigne B, Christophe T, Brodin P, Genovesio A

机构信息

Image Mining Group, Institut Pasteur Korea, Hawolgok-dong, Seongbuk-gu, Seoul 136-791, Korea.

出版信息

Cytometry A. 2008 Oct;73(10):958-64. doi: 10.1002/cyto.a.20627.

DOI:10.1002/cyto.a.20627
PMID:18752283
Abstract

High-throughput, high-content screening (HT-HCS) of large compound libraries for drug discovery imposes new constraints on image analysis algorithms. Time and robustness are paramount while accuracy is intrinsically statistical. In this article, a fast and fully automated algorithm for cell segmentation is proposed. The algorithm is based on a strong attachment to the data that provide robustness and have been validated on the HT-HCS of large compound libraries and different biological assays. We present the algorithm and its performance, a description of its advantages and limitations, and a discussion of its range of application.

摘要

用于药物发现的大型化合物库的高通量、高内涵筛选(HT-HCS)对图像分析算法提出了新的限制。时间和稳健性至关重要,而准确性本质上是统计学的。本文提出了一种用于细胞分割的快速且全自动的算法。该算法基于对数据的紧密依附,从而提供稳健性,并且已经在大型化合物库的HT-HCS和不同生物学检测中得到验证。我们展示了该算法及其性能,描述了其优缺点,并讨论了其应用范围。

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