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烟曲霉分生孢子休眠解除的转录组分析

Transcriptomic analysis of the exit from dormancy of Aspergillus fumigatus conidia.

作者信息

Lamarre Claude, Sokol Sergueï, Debeaupuis Jean-Paul, Henry Christine, Lacroix Céline, Glaser Philippe, Coppée Jean-Yves, François Jean-Marie, Latgé Jean-Paul

机构信息

Unité des Aspergillus, Institut Pasteur, 25 rue du Docteur Roux, 75724 Paris Cedex 15, France.

出版信息

BMC Genomics. 2008 Sep 16;9:417. doi: 10.1186/1471-2164-9-417.

Abstract

BACKGROUND

Establishment of aspergillosis is depending upon the exit from dormancy and germination of the conidia of Aspergillus fumigatus in the lung. To gain an understanding of the molecular mechanisms underlying the early steps of conidial germination, we undertook a transcriptomic analysis using macroarrays constructed with PCR fragments from > 3,000 genes (around one third of the annotated A. fumigatus genome).

RESULTS

Major results of this analysis are the following: (i) conidia stored pre-packaged mRNAs transcripts (27% of genes have transcripts in the resting conidia; (ii) incubation at 37 degrees C in a nutritive medium induced up- and down-regulation of genes: 19% of the total number of genes deposited on the array were up-regulated whereas 22% of the genes with pre-packaged mRNA in the resting conidia were down-regulated; (iii) most modifications were seen during the first 30 min of germination whereas very little modification of gene expression occurred during the following hour; (iv) one-year old conidia and one-week old conidia behaved similarly at transcriptional level.

CONCLUSION

Transcriptomic data indicate that the exit from dormancy is associated with a shift from a fermentative metabolism to a respiratory metabolism as well as a trend toward immediate protein synthesis.

摘要

背景

曲霉菌病的发生取决于烟曲霉分生孢子在肺部从休眠状态逸出并萌发。为了了解分生孢子萌发早期步骤的分子机制,我们使用由超过3000个基因(约占注释的烟曲霉基因组的三分之一)的PCR片段构建的宏阵列进行了转录组分析。

结果

该分析的主要结果如下:(i)分生孢子储存有预先包装的mRNA转录本(27%的基因在静止分生孢子中有转录本);(ii)在营养培养基中于37℃孵育诱导基因上调和下调:阵列上沉积的基因总数的19%被上调,而静止分生孢子中带有预先包装mRNA的基因的22%被下调;(iii)大多数修饰发生在萌发的前30分钟,而在接下来的一小时内基因表达的修饰很少;(iv)一岁分生孢子和一周分生孢子在转录水平上表现相似。

结论

转录组数据表明,从休眠状态逸出与从发酵代谢向呼吸代谢的转变以及立即进行蛋白质合成的趋势有关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/81d7/2556354/4c0092fb04ce/1471-2164-9-417-1.jpg

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