Gonzalez Elena G, Beerli Peter, Zardoya Rafael
Department of Biodiversity and Evolutionary Biology, Museo Nacional de Ciencias Naturales, CSIC, José Gutiérrez Abascal, 2; 28006 Madrid, Spain.
BMC Evol Biol. 2008 Sep 17;8:252. doi: 10.1186/1471-2148-8-252.
Large pelagic fishes are generally thought to have little population genetic structuring based on their cosmopolitan distribution, large population sizes and high dispersal capacities. However, gene flow can be influenced by ecological (e.g. homing behaviour) and physical (e.g. present-day ocean currents, past changes in sea temperature and levels) factors. In this regard, Atlantic bigeye tuna shows an interesting genetic structuring pattern with two highly divergent mitochondrial clades (Clades I and II), which are assumed to have been originated during the last Pleistocene glacial maxima. We assess genetic structure patterns of Atlantic bigeye tuna at the nuclear level, and compare them with mitochondrial evidence.
We examined allele size variation of nine microsatellite loci in 380 individuals from the Gulf of Guinea, Canary, Azores, Canada, Indian Ocean, and Pacific Ocean. To investigate temporal stability of genetic structure, three Atlantic Ocean sites were re-sampled a second year. Hierarchical AMOVA tests, RST pairwise comparisons, isolation by distance (Mantel) tests, Bayesian clustering analyses, and coalescence-based migration rate inferences supported unrestricted gene flow within the Atlantic Ocean at the nuclear level, and therefore interbreeding between individuals belonging to both mitochondrial clades. Moreover, departures from HWE in several loci were inferred for the samples of Guinea, and attributed to a Wahlund effect supporting the role of this region as a spawning and nursery area. Our microsatellite data supported a single worldwide panmictic unit for bigeye tunas. Despite the strong Agulhas Current, immigration rates seem to be higher from the Atlantic Ocean into the Indo-Pacific Ocean, but the actual number of individuals moving per generation is relatively low compared to the large population sizes inhabiting each ocean basin.
Lack of congruence between mt and nuclear evidences, which is also found in other species, most likely reflects past events of isolation and secondary contact. Given the inferred relatively low number of immigrants per generation around the Cape of Good Hope, the proportions of the mitochondrial clades in the different oceans may keep stable, and it seems plausible that the presence of individuals belonging to the mt Clade I in the Atlantic Ocean may be due to extensive migrations that predated the last glaciation.
大型远洋鱼类通常被认为由于其世界性分布、庞大的种群规模和高扩散能力,种群遗传结构很少。然而,基因流会受到生态因素(如归巢行为)和物理因素(如当前洋流、过去海水温度和海平面变化)的影响。在这方面,大西洋大眼金枪鱼呈现出一种有趣的遗传结构模式,有两个高度分化的线粒体分支(分支I和分支II),据推测这两个分支起源于末次更新世冰期最大值时期。我们在核水平评估大西洋大眼金枪鱼的遗传结构模式,并将其与线粒体证据进行比较。
我们检测了来自几内亚湾、加那利群岛、亚速尔群岛、加拿大、印度洋和太平洋的380个个体中9个微卫星位点的等位基因大小变异。为了研究遗传结构的时间稳定性,第二年对三个大西洋海域进行了重新采样。层次AMOVA检验、RST成对比较、距离隔离(Mantel)检验、贝叶斯聚类分析以及基于溯祖理论的迁移率推断支持了在核水平上大西洋内部不受限制的基因流,因此属于两个线粒体分支的个体之间存在杂交。此外,几内亚样本中几个位点偏离了哈迪 - 温伯格平衡(HWE),这归因于瓦伦德效应,支持了该地区作为产卵和育幼区的作用。我们的微卫星数据支持大眼金枪鱼存在一个单一的全球随机交配单位。尽管有强大的厄加勒斯洋流,但从大西洋进入印太地区的移民率似乎更高,不过与每个海洋盆地庞大的种群规模相比,每代实际迁移的个体数量相对较低。
线粒体和核证据之间缺乏一致性,这在其他物种中也有发现,很可能反映了过去的隔离和二次接触事件。鉴于推断出的好望角附近每代移民数量相对较低,不同海洋中线粒体分支的比例可能会保持稳定,而且大西洋中属于线粒体分支I的个体的存在可能是由于末次冰期之前的大规模迁移,这似乎是合理的。