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生活史特征和历史因素在塑造沙丁鱼(Sardina pilchardus)遗传种群结构中的相对作用。

Relative role of life-history traits and historical factors in shaping genetic population structure of sardines (Sardina pilchardus).

作者信息

Gonzalez Elena G, Zardoya Rafael

机构信息

Departamento de Biodiversidad y Biología Evolutiva, Museo Nacional de Ciencias Naturales, CSIC, José Gutiérrez Abascal, 2; 28006 Madrid, Spain.

出版信息

BMC Evol Biol. 2007 Oct 22;7:197. doi: 10.1186/1471-2148-7-197.

Abstract

BACKGROUND

Marine pelagic fishes exhibit rather complex patterns of genetic differentiation, which are the result of both historical processes and present day gene flow. Comparative multi-locus analyses based on both nuclear and mitochondrial genetic markers are probably the most efficient and informative approach to discerning the relative role of historical events and life-history traits in shaping genetic heterogeneity. The European sardine (Sardina pilchardus) is a small pelagic fish with a relatively high migratory capability that is expected to show low levels of genetic differentiation among populations. Previous genetic studies based on meristic and mitochondrial control region haplotype frequency data supported the existence of two sardine subspecies (S. p. pilchardus and S. p. sardina).

RESULTS

We investigated genetic structure of sardine among nine locations in the Atlantic Ocean and Mediterranean Sea using allelic size variation of eight specific microsatellite loci. Bayesian clustering and assignment tests, maximum likelihood estimates of migration rates, as well as classical genetic-variance-based methods (hierarchical AMOVA test and RST pairwise comparisons) supported a single evolutionary unit for sardines. These analyses only detected weak but significant genetic differentiation, which followed an isolation-by-distance pattern according to Mantel test.

CONCLUSION

We suggest that the discordant genetic structuring patterns inferred based on mitochondrial and microsatellite data might indicate that the two different classes of molecular markers may be reflecting different and complementary aspects of the evolutionary history of sardine. Mitochondrial data might be reflecting past isolation of sardine populations into two distinct groupings during Pleistocene whereas microsatellite data reveal the existence of present day gene flow among populations, and a pattern of isolation by distance.

摘要

背景

海洋中上层鱼类呈现出相当复杂的遗传分化模式,这是历史进程和当今基因流动共同作用的结果。基于核基因和线粒体基因标记的多基因座比较分析可能是辨别历史事件和生活史特征在塑造遗传异质性过程中相对作用的最有效且信息丰富的方法。欧洲沙丁鱼(Sardina pilchardus)是一种具有较高洄游能力的小型中上层鱼类,预计其种群间的遗传分化水平较低。先前基于可数性状和线粒体控制区单倍型频率数据的遗传研究支持存在两个沙丁鱼亚种(S. p. pilchardus和S. p. sardina)。

结果

我们利用八个特定微卫星位点的等位基因大小变异,研究了大西洋和地中海九个地点的沙丁鱼遗传结构。贝叶斯聚类和归属测试、迁移率的最大似然估计以及基于经典遗传方差的方法(层次AMOVA测试和RST成对比较)都支持沙丁鱼为单一进化单元。这些分析仅检测到微弱但显著的遗传分化,根据Mantel测试,这种分化呈现出距离隔离模式。

结论

我们认为,基于线粒体和微卫星数据推断出的不一致的遗传结构模式可能表明,这两类不同的分子标记可能反映了沙丁鱼进化历史中不同且互补的方面。线粒体数据可能反映了更新世期间沙丁鱼种群过去被隔离成两个不同的群体,而微卫星数据揭示了当今种群间基因流动的存在以及距离隔离模式。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd89/2204010/dd336ee2d7db/1471-2148-7-197-1.jpg

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