Cairns Andrew J, Turner Lesley B, Gallagher Joseph A
Institute of Biological Environmental and Rural Sciences, Aberystwyth University, Gogerddan SY233EB, UK.
New Phytol. 2008;180(4):832-40. doi: 10.1111/j.1469-8137.2008.02616.x. Epub 2008 Sep 16.
Valid models are the foundation of systems biology. However, even well-established models may warrant reassessment. A testable feature of the currently accepted vacuolar model for fructan biosynthesis is its independence from metabolic energy at substrate level. The effects of limiting energy provision on fructan biosynthesis in grass leaves were determined. It was found that, in darkness in air, the rate of fructan accumulation was reduced to half relative to a light control. In darkness under anoxia the process was immediately abolished. In the light, the leaf sucrose concentration remained high, but in darkness +/- O(2), 40% of this sucrose was rapidly degraded. The constant rate of dark-aerobic fructan accumulation was independent of the decrease in sucrose concentration. Constant rates of aerobic fructan synthesis were independent of marked changes in extractable polymerase rates. In the dark under anoxia, fructan accumulation was abolished but leaves maintained > or = 80% of the extractable polymerase. Extractable polymerase rates cannot explain the rates of fructan accumulation observed in vivo, if the process is vacuolar. It was shown that the results were inconsistent with a vacuolar site for fructan synthesis. Six inhibitors of endomembrane function were shown to abolish fructan synthesis in vivo.
有效的模型是系统生物学的基础。然而,即使是成熟的模型也可能需要重新评估。目前被接受的果聚糖生物合成液泡模型的一个可测试特征是其在底物水平上对代谢能量的独立性。测定了限制能量供应对草叶中果聚糖生物合成的影响。结果发现,在空气中黑暗条件下,果聚糖积累速率相对于光照对照降低至一半。在缺氧黑暗条件下,该过程立即停止。在光照下,叶片蔗糖浓度保持较高,但在黑暗有氧/无氧条件下,40%的蔗糖迅速降解。黑暗需氧条件下果聚糖积累的恒定速率与蔗糖浓度的降低无关。需氧果聚糖合成的恒定速率与可提取聚合酶速率的显著变化无关。在缺氧黑暗条件下,果聚糖积累停止,但叶片仍保持≥80%的可提取聚合酶。如果果聚糖合成过程发生在液泡中,可提取聚合酶速率无法解释体内观察到的果聚糖积累速率。结果表明,这些结果与果聚糖合成的液泡位点不一致。六种内膜功能抑制剂在体内可消除果聚糖合成。