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用于将重组DNA整合到嗜甲基甲基ophilus基因组中的噬菌体Mu驱动的双质粒系统。

Phage Mu-driven two-plasmid system for integration of recombinant DNA in the Methylophilus methylotrophus genome.

作者信息

Abalakina Elena G, Tokmakova Irina L, Gorshkova Natalya V, Gak Evgueni R, Akhverdyan Valerii Z, Mashko Sergey V, Yomantas Yurgis A V

机构信息

Ajinomoto-Genetika Research Institute, 117545, Moscow, Russian Federation.

出版信息

Appl Microbiol Biotechnol. 2008 Nov;81(1):191-200. doi: 10.1007/s00253-008-1696-7. Epub 2008 Sep 27.

Abstract

A phage Mu-driven two-plasmid system for DNA integration in Escherichia coli genome has been adjusted for Methylophilus methylotrophus. Constructed helper plasmids with broad-host-range replicons carry thermo-inducible genes for transposition factors MuA and MuB. Integrative plasmids that are only replicated in E. coli could be mobilized to M. methylotrophus and contained mini-Mu unit with a short terminus of Mu DNA, Mu-attL/R. Mini-Mu unit was integrated in the M. methylotrophus genome via mobilization of the integrative plasmid to the cells carrying the helper in conditions of thermo-induced expression of MuA and MuB. In this system, mini-Mu unit was mainly integrated due to replicative transposition, and the integrated copy could be amplified in the M. methylotrophus chromosome in the presence of helper plasmid. A kan-gene flanked by FRT sites was inserted in one of the mini-Mu units, and it could be readily excised by yeast FLP recombinase that is encoded by the designed plasmid. The multiple Mu-driven gene insertion was carried out by integration of the Bacillus amyloliquefaciens alpha-amylase gene followed by curing the KmR marker before integration of the second mini-Mu unit with Pseudomonas putida xylE gene encoding catechol 2,3-dioxygenase (C23O).

摘要

一种用于在大肠杆菌基因组中进行DNA整合的噬菌体Mu驱动的双质粒系统已针对嗜甲基甲基ophilus进行了调整。构建的带有广泛宿主范围复制子的辅助质粒携带转座因子MuA和MuB的热诱导基因。仅在大肠杆菌中复制的整合质粒可以被转移到嗜甲基甲基ophilus中,并包含带有短Mu DNA末端Mu-attL/R的mini-Mu单元。在MuA和MuB热诱导表达的条件下,通过将整合质粒转移到携带辅助质粒的细胞中,mini-Mu单元被整合到嗜甲基甲基ophilus基因组中。在这个系统中,mini-Mu单元主要通过复制性转座进行整合,并且在存在辅助质粒的情况下,整合的拷贝可以在嗜甲基甲基ophilus染色体中扩增。一个两侧带有FRT位点的kan基因被插入到其中一个mini-Mu单元中,并且它可以很容易地被设计质粒编码的酵母FLP重组酶切除。通过整合解淀粉芽孢杆菌α-淀粉酶基因,然后在整合第二个带有编码儿茶酚2,3-双加氧酶(C23O)的恶臭假单胞菌xylE基因的mini-Mu单元之前去除KmR标记,进行了多次Mu驱动的基因插入。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eeaa/7419445/46942a8c948b/253_2008_1696_Fig1_HTML.jpg

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