Alain Karine, Intertaglia Laurent, Catala Philippe, Lebaron Philippe
UPMC Univ Paris 06, UMR7621, Observatoire Océanologique, F-66650 Banyuls-sur-Mer, France.
Int J Syst Evol Microbiol. 2008 Oct;58(Pt 10):2275-81. doi: 10.1099/ijs.0.65446-0.
A novel aerobic, non-motile, Gram-negative bacterium, designated AS06/20a(T), was isolated from coastal waters of the Adriatic Sea and subjected to polyphasic taxonomic analysis. Cells were rod-shaped and formed non-pigmented punctiform colonies on agar plates. The novel isolate grew heterotrophically on a variety of carbon compounds, including organic acids, carbohydrates, polyols, amino acids and complex organic substrates. Cells grew at 15-33 degrees C (optimum 30 degrees C), pH 6.5-8.5 (optimum pH 7.5-8.0) and between 2 and 6 % (w/v) NaCl (optimum 2 %). The dominant fatty acids (>5 %) detected in strain AS06/20a(T) were iso-C(15 : 1) G, iso-C(15 : 0), iso-C(15 : 0) 3-OH, iso-C(17 : 1)omega9c and iso-C(17 : 0) 3-OH. The major respiratory quinone was MK-6. The G+C content of the genomic DNA was 38.9 mol%. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain AS06/20a(T) fell within the family Flavobacteriaceae in the phylum Bacteroidetes. Comparative 16S rRNA gene sequence analysis indicated that strain AS06/20a(T) was most closely related to members of the genera Zeaxanthinibacter and Robiginitalea, sharing 92-93 % 16S rRNA gene sequence similarity with representatives of these genera. It is proposed, from the results of the polyphasic taxonomic analysis, that the strain should be placed in a new genus, Eudoraea gen. nov., with Eudoraea adriatica sp. nov. as the type species. The type strain is AS06/20a(T) (=DSM 19308(T)=CIP 109577(T)=OOB 358(T)).
从亚得里亚海沿海水域分离出一株新的需氧、无运动性、革兰氏阴性细菌,命名为AS06/20a(T),并对其进行了多相分类分析。细胞呈杆状,在琼脂平板上形成无色素的点状菌落。该新分离株能在多种碳化合物上进行异养生长,包括有机酸、碳水化合物、多元醇、氨基酸和复杂有机底物。细胞在15-33℃(最适温度30℃)、pH 6.5-8.5(最适pH 7.5-8.0)和2%-6%(w/v)NaCl(最适2%)条件下生长。在菌株AS06/20a(T)中检测到的主要脂肪酸(>5%)为异-C(15 : 1) G、异-C(15 : 0)、异-C(15 : 0) 3-OH、异-C(17 : 1)ω9c和异-C(17 : 0) 3-OH。主要呼吸醌为MK-6。基因组DNA的G+C含量为38.9 mol%。基于16S rRNA基因序列的系统发育分析表明,菌株AS06/20a(T)属于拟杆菌门黄杆菌科。比较16S rRNA基因序列分析表明,菌株AS06/20a(T)与玉米黄质杆菌属和嗜铁杆菌属的成员关系最为密切,与这些属的代表菌株共享92%-93%的16S rRNA基因序列相似性。根据多相分类分析结果,建议将该菌株归入一个新属,即真多拉菌属(Eudoraea gen. nov.),以亚得里亚海真多拉菌(Eudoraea adriatica sp. nov.)作为模式种。模式菌株为AS06/20a(T)(=DSM 19308(T)=CIP 109577(T)=OOB 358(T))。