• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

药物基因组学知识库:了解个体基因变异的影响。

PharmGKB: understanding the effects of individual genetic variants.

作者信息

Sangkuhl Katrin, Berlin Dorit S, Altman Russ B, Klein Teri E

机构信息

Department of Genetics, Stanford University, Stanford, California 94305-5120, USA.

出版信息

Drug Metab Rev. 2008;40(4):539-51. doi: 10.1080/03602530802413338.

DOI:10.1080/03602530802413338
PMID:18949600
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2677552/
Abstract

The Pharmacogenetics and Pharmacogenomics Knowledge Base (PharmGKB: http://www.pharmgkb.org) is devoted to disseminating primary data and knowledge in pharmacogenetics and pharmacogenomics. We are annotating the genes that are most important for drug response and present this information in the form of Very Important Pharmacogene (VIP) summaries, pathway diagrams, and curated literature. The PharmGKB currently contains information on over 500 drugs, 500 diseases, and 700 genes with genotyped variants. New features focus on capturing the phenotypic consequences of individual genetic variants. These features link variant genotypes to phenotypes, increase the breadth of pharmacogenomics literature curated, and visualize single-nucleotide polymorphisms on a gene's three-dimensional protein structure.

摘要

药物遗传学和药物基因组学知识库(PharmGKB:http://www.pharmgkb.org)致力于传播药物遗传学和药物基因组学的原始数据及知识。我们正在注释对药物反应最为重要的基因,并以非常重要的药物基因(VIP)总结、通路图和精选文献的形式呈现这些信息。PharmGKB目前包含有关500多种药物、500多种疾病以及700个具有基因分型变异的基因的信息。新功能着重于捕捉个体基因变异的表型后果。这些功能将变异基因型与表型相联系,增加了所精选的药物基因组学文献的广度,并在基因的三维蛋白质结构上直观显示单核苷酸多态性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1e4/2677552/6fbe5d2ec53a/nihms108007f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1e4/2677552/96833d2d8b65/nihms108007f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1e4/2677552/b6036ea586aa/nihms108007f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1e4/2677552/bb78c61f68aa/nihms108007f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1e4/2677552/e21ab2eae701/nihms108007f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1e4/2677552/927937bfff0f/nihms108007f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1e4/2677552/b7e0f5cf6c51/nihms108007f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1e4/2677552/6fbe5d2ec53a/nihms108007f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1e4/2677552/96833d2d8b65/nihms108007f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1e4/2677552/b6036ea586aa/nihms108007f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1e4/2677552/bb78c61f68aa/nihms108007f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1e4/2677552/e21ab2eae701/nihms108007f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1e4/2677552/927937bfff0f/nihms108007f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1e4/2677552/b7e0f5cf6c51/nihms108007f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1e4/2677552/6fbe5d2ec53a/nihms108007f7.jpg

相似文献

1
PharmGKB: understanding the effects of individual genetic variants.药物基因组学知识库:了解个体基因变异的影响。
Drug Metab Rev. 2008;40(4):539-51. doi: 10.1080/03602530802413338.
2
PharmGKB: the Pharmacogenomics Knowledge Base.药物基因组学知识库(PharmGKB)
Methods Mol Biol. 2013;1015:311-20. doi: 10.1007/978-1-62703-435-7_20.
3
PharmGKB and the International Warfarin Pharmacogenetics Consortium: the changing role for pharmacogenomic databases and single-drug pharmacogenetics.药物基因组学知识库(PharmGKB)与国际华法林药物基因组学联盟:药物基因组学数据库及单药药物基因组学的角色转变
Hum Mutat. 2008 Apr;29(4):456-60. doi: 10.1002/humu.20731.
4
The pharmacogenetics and pharmacogenomics knowledge base: accentuating the knowledge.药物遗传学和药物基因组学知识库:强化知识。
Nucleic Acids Res. 2008 Jan;36(Database issue):D913-8. doi: 10.1093/nar/gkm1009. Epub 2007 Nov 21.
5
PharmGKB: the Pharmacogenetics Knowledge Base.药物基因组学知识库(PharmGKB)
Nucleic Acids Res. 2002 Jan 1;30(1):163-5. doi: 10.1093/nar/30.1.163.
6
Pharmacogenomics and bioinformatics: PharmGKB.药物基因组学和生物信息学:PharmGKB。
Pharmacogenomics. 2010 Apr;11(4):501-5. doi: 10.2217/pgs.10.15.
7
PharmGKB: an integrated resource of pharmacogenomic data and knowledge.药物基因组知识库(PharmGKB):药物基因组学数据与知识的综合资源。
Curr Protoc Bioinformatics. 2008 Sep;Chapter 14:14.7.1-14.7.17. doi: 10.1002/0471250953.bi1407s23.
8
PharmGKB, an Integrated Resource of Pharmacogenomic Knowledge.PharmGKB,一个综合性的药物基因组学知识库。
Curr Protoc. 2021 Aug;1(8):e226. doi: 10.1002/cpz1.226.
9
The education potential of the pharmacogenetics and pharmacogenomics knowledge base (PharmGKB).药物遗传学和药物基因组学知识库(PharmGKB)的教育潜力。
Clin Pharmacol Ther. 2007 Oct;82(4):472-5. doi: 10.1038/sj.clpt.6100332. Epub 2007 Aug 22.
10
PharmGKB: the pharmacogenetics and pharmacogenomics knowledge base.药物基因组学知识库(PharmGKB):药物遗传学与药物基因组学知识库
Methods Mol Biol. 2005;311:179-91. doi: 10.1385/1-59259-957-5:179.

引用本文的文献

1
Pharmacogenomics Tools for Precision Public Health and Lessons for Low- and Middle-Income Countries: A Scoping Review.用于精准公共卫生的药物基因组学工具及对低收入和中等收入国家的启示:一项范围综述
Pharmgenomics Pers Med. 2025 Jan 30;18:19-34. doi: 10.2147/PGPM.S490135. eCollection 2025.
2
Quantifying allele-specific CRISPR editing activity with CRISPECTOR2.0.利用 CRISPECTOR2.0 定量分析等位基因特异性 CRISPR 编辑活性。
Nucleic Acids Res. 2024 Sep 9;52(16):e78. doi: 10.1093/nar/gkae651.
3
Maturing pharmacogenomic factors deliver improvements and cost efficiencies.

本文引用的文献

1
Pharmspresso: a text mining tool for extraction of pharmacogenomic concepts and relationships from full text.Pharmspresso:一种用于从全文中提取药物基因组学概念和关系的文本挖掘工具。
BMC Bioinformatics. 2009 Feb 5;10 Suppl 2(Suppl 2):S6. doi: 10.1186/1471-2105-10-S2-S6.
2
PharmGKB and the International Warfarin Pharmacogenetics Consortium: the changing role for pharmacogenomic databases and single-drug pharmacogenetics.药物基因组学知识库(PharmGKB)与国际华法林药物基因组学联盟:药物基因组学数据库及单药药物基因组学的角色转变
Hum Mutat. 2008 Apr;29(4):456-60. doi: 10.1002/humu.20731.
3
MScanner: a classifier for retrieving Medline citations.
成熟的药物基因组学因素带来了改善和成本效益。
Camb Prism Precis Med. 2022 Oct 6;1:e3. doi: 10.1017/pcm.2022.3. eCollection 2023.
4
Leveraging a pharmacogenomics knowledgebase to formulate a drug response phenotype terminology for genomic medicine.利用药物基因组学知识库为基因组医学构建药物反应表型术语。
Bioinformatics. 2022 Nov 30;38(23):5279-5287. doi: 10.1093/bioinformatics/btac646.
5
Exploring complex and heterogeneous correlations on hypergraph for the prediction of drug-target interactions.探索超图上的复杂异质相关性以预测药物-靶点相互作用。
Patterns (N Y). 2021 Nov 16;2(12):100390. doi: 10.1016/j.patter.2021.100390. eCollection 2021 Dec 10.
6
Pharmacogenetic Testing: A Tool for Personalized Drug Therapy Optimization.药物遗传学检测:优化个性化药物治疗的工具
Pharmaceutics. 2020 Dec 19;12(12):1240. doi: 10.3390/pharmaceutics12121240.
7
Genetic Polymorphisms of Pharmacogenes among the Genetically Isolated Circassian Subpopulation from Jordan.约旦切尔克斯族遗传隔离亚群中药物代谢基因的遗传多态性
J Pers Med. 2020 Jan 6;10(1):2. doi: 10.3390/jpm10010002.
8
The Clinical Genome and Ancestry Report: An interactive web application for prioritizing clinically implicated variants from genome sequencing data with ancestry composition.临床基因组和祖源报告:一个用于从基因组测序数据中根据祖源成分优先考虑具有临床意义的变异的交互式网络应用程序。
Hum Mutat. 2020 Feb;41(2):387-396. doi: 10.1002/humu.23942. Epub 2019 Nov 15.
9
Variation in Actionable Pharmacogenetic Markers in Natives and Mestizos From Mexico.墨西哥原住民和混血儿中可操作的药物遗传学标志物的差异。
Front Pharmacol. 2019 Oct 10;10:1169. doi: 10.3389/fphar.2019.01169. eCollection 2019.
10
Genetic Variants Associated with Cancer Pain and Response to Opioid Analgesics: Implications for Precision Pain Management.与癌症疼痛和阿片类镇痛药反应相关的遗传变异:精准疼痛管理的意义。
Semin Oncol Nurs. 2019 Jun;35(3):291-299. doi: 10.1016/j.soncn.2019.04.011. Epub 2019 May 10.
MScanner:一种用于检索医学文献数据库(Medline)引用文献的分类器。
BMC Bioinformatics. 2008 Feb 19;9:108. doi: 10.1186/1471-2105-9-108.
4
The UCSC Genome Browser Database: 2008 update.加州大学圣克鲁兹分校基因组浏览器数据库:2008年更新版。
Nucleic Acids Res. 2008 Jan;36(Database issue):D773-9. doi: 10.1093/nar/gkm966. Epub 2007 Dec 17.
5
Tamoxifen: catalyst for the change to targeted therapy.他莫昔芬:靶向治疗变革的催化剂。
Eur J Cancer. 2008 Jan;44(1):30-8. doi: 10.1016/j.ejca.2007.11.002.
6
The pharmacogenetics and pharmacogenomics knowledge base: accentuating the knowledge.药物遗传学和药物基因组学知识库:强化知识。
Nucleic Acids Res. 2008 Jan;36(Database issue):D913-8. doi: 10.1093/nar/gkm1009. Epub 2007 Nov 21.
7
Breast cancer treatment outcome with adjuvant tamoxifen relative to patient CYP2D6 and CYP2C19 genotypes.辅助性他莫昔芬治疗乳腺癌的疗效与患者细胞色素P450 2D6和细胞色素P450 2C19基因分型的关系。
J Clin Oncol. 2007 Nov 20;25(33):5187-93. doi: 10.1200/JCO.2007.12.2705.
8
The education potential of the pharmacogenetics and pharmacogenomics knowledge base (PharmGKB).药物遗传学和药物基因组学知识库(PharmGKB)的教育潜力。
Clin Pharmacol Ther. 2007 Oct;82(4):472-5. doi: 10.1038/sj.clpt.6100332. Epub 2007 Aug 22.
9
The pharmacogenetics research network: from SNP discovery to clinical drug response.药物遗传学研究网络:从单核苷酸多态性发现到临床药物反应
Clin Pharmacol Ther. 2007 Mar;81(3):328-45. doi: 10.1038/sj.clpt.6100087.
10
The PharmGKB: integration, aggregation, and annotation of pharmacogenomic data and knowledge.药物基因组学知识库(PharmGKB):药物基因组学数据与知识的整合、汇总及注释
Clin Pharmacol Ther. 2007 Jan;81(1):21-4. doi: 10.1038/sj.clpt.6100048.