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ADP核糖基环化酶的分级螺旋自组装形成大规模蛋白质微管。

Hierarchical and helical self-assembly of ADP-ribosyl cyclase into large-scale protein microtubes.

作者信息

Liu Qun, Kriksunov Irina A, Wang Zhongwu, Graeff Richard, Lee Hon Cheung, Hao Quan

出版信息

J Phys Chem B. 2008 Nov 27;112(47):14682-6. doi: 10.1021/jp807990g.

DOI:10.1021/jp807990g
PMID:18956900
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3732379/
Abstract

Proteins are macromolecules with characteristic structures and biological functions. It is extremely challenging to obtain protein microtube structures through self-assembly as proteins are very complex and flexible. Here we present a strategy showing how a specific protein, ADP-ribosyl cyclase, helically self-assembles from monomers into hexagonal nanochains and further to highly ordered crystalline microtubes. The structures of protein nanochains and consequently self-assembled superlattice were determined by X-ray crystallography at 4.5 A resolution and imaged by scanning electron microscopy. The protein initially forms into dimers that have a fixed size of 5.6 nm, and then, helically self-assembles into 35.6 nm long hexagonal nanochains. One such nanochain consists of six dimers (12 monomers) that stack in order by a pseudo P6(1) screw axis. Seven nanochains produce a series of large-scale assemblies, nanorods, forming the building blocks for microrods. A proposed aging process of microrods results in the formation of hollow microstructures. Synthesis and characterization of large scale self-assembled protein microtubes may pave a new pathway, capable of not only understanding the self-assembly dynamics of biological materials, but also directing design and fabrication of multifunctional nanobuilding blocks with particular applications in biomedical engineering.

摘要

蛋白质是具有特定结构和生物学功能的大分子。由于蛋白质非常复杂且具有柔韧性,通过自组装获得蛋白质微管结构极具挑战性。在此,我们展示了一种策略,即特定蛋白质——ADP核糖基环化酶如何从单体螺旋自组装成六边形纳米链,并进一步形成高度有序的晶体微管。通过X射线晶体学以4.5埃分辨率确定了蛋白质纳米链以及由此自组装的超晶格的结构,并通过扫描电子显微镜成像。该蛋白质最初形成大小固定为5.6纳米的二聚体,然后螺旋自组装成35.6纳米长的六边形纳米链。这样一条纳米链由六个二聚体(12个单体)组成,它们通过一个假P6(1)螺旋轴依次堆叠。七条纳米链产生一系列大规模组装体——纳米棒,形成微棒的构建单元。微棒的一个推测老化过程导致中空微结构的形成。大规模自组装蛋白质微管的合成与表征可能会开辟一条新途径,不仅能够理解生物材料的自组装动力学,还能指导多功能纳米构建单元的设计与制造,在生物医学工程中有特定应用。

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本文引用的文献

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Solving structures of protein complexes by molecular replacement with Phaser.使用Phaser通过分子置换法解析蛋白质复合物的结构。
Acta Crystallogr D Biol Crystallogr. 2007 Jan;63(Pt 1):32-41. doi: 10.1107/S0907444906045975. Epub 2006 Dec 13.
2
Nanoparticle-templated assembly of viral protein cages.基于纳米颗粒模板的病毒蛋白笼组装。
Nano Lett. 2006 Apr;6(4):611-5. doi: 10.1021/nl0600878.
3
Structural intermediates in microtubule assembly and disassembly: how and why?微管组装与拆卸过程中的结构中间体:方式与原因?
Curr Opin Cell Biol. 2006 Apr;18(2):179-84. doi: 10.1016/j.ceb.2006.02.009. Epub 2006 Feb 21.
4
A classic assembly of nanobiomaterials.
Nat Biotechnol. 2005 Nov;23(11):1379-80. doi: 10.1038/nbt1105-1379.
5
Structural characterization of the molecular platform for type III secretion system assembly.III型分泌系统组装分子平台的结构表征
Nature. 2005 Jun 2;435(7042):702-7. doi: 10.1038/nature03554.
6
Structural insights into the assembly of the type III secretion needle complex.III型分泌针状复合体组装的结构见解
Science. 2004 Nov 5;306(5698):1040-2. doi: 10.1126/science.1102610.
7
Materials science. Smart biomaterials.材料科学。智能生物材料。
Science. 2004 Sep 24;305(5692):1923-4. doi: 10.1126/science.1099987.
8
Self-assembling peptides and proteins for nanotechnological applications.用于纳米技术应用的自组装肽和蛋白质。
Curr Opin Struct Biol. 2004 Aug;14(4):480-6. doi: 10.1016/j.sbi.2004.06.006.
9
The emerging field of nanotube biotechnology.纳米管生物技术这一新兴领域。
Nat Rev Drug Discov. 2003 Jan;2(1):29-37. doi: 10.1038/nrd988.
10
Beyond molecules: self-assembly of mesoscopic and macroscopic components.超越分子:介观和宏观组件的自组装
Proc Natl Acad Sci U S A. 2002 Apr 16;99(8):4769-74. doi: 10.1073/pnas.082065899.