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一种与分子探针兼容的丛枝菌根改良染色技术。

A modified staining technique for arbuscular mycorrhiza compatible with molecular probes.

作者信息

Pitet M, Camprubí A, Calvet C, Estaún V

机构信息

Plant Protection IRTA, Ctra. de Cabrils Km 2, E-08348 Cabrils, Barcelona, Spain.

出版信息

Mycorrhiza. 2009 Feb;19(2):125-131. doi: 10.1007/s00572-008-0206-1. Epub 2008 Oct 29.

DOI:10.1007/s00572-008-0206-1
PMID:18958505
Abstract

The effects of the different steps of the root staining on the arbuscular mycorrhizal (AM) fungal rDNA extraction and amplification have been assessed. The results obtained using molecular techniques are compared with those obtained from fresh, non-stained leek roots. A modified staining procedure that eliminates heating, the use of hydrochloric acid and trypan blue, has been proved to be the most adequate to observe the AM colonisation in different plant species with/without lignified roots allowing at the same time the subsequent rDNA extraction and amplification from the stained roots. The staining technique decreased the sensitivity of the process and a higher number of roots had to be used to obtain enough material for a positive amplification. The extraction and amplification process was reliable up to 3 days after staining. A week after staining, the amplification was not dependable and after 2 weeks there was no amplification from stained material.

摘要

已评估了根部染色不同步骤对丛枝菌根(AM)真菌rDNA提取和扩增的影响。将使用分子技术获得的结果与从新鲜、未染色的韭菜根获得的结果进行了比较。一种改进的染色程序,该程序省去了加热、盐酸和台盼蓝的使用,已被证明最适合观察不同植物物种(无论有无木质化根)中的AM定殖,同时允许随后从染色的根中提取和扩增rDNA。染色技术降低了该过程的灵敏度,必须使用更多数量的根才能获得足够的材料进行阳性扩增。染色后3天内,提取和扩增过程是可靠的。染色一周后,扩增不可靠,两周后染色材料未出现扩增。

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本文引用的文献

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Phytochemistry. 2008 May;69(8):1680-8. doi: 10.1016/j.phytochem.2008.02.015. Epub 2008 Apr 1.
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Effects of trypan blue on cell viability and gene expression in human retinal pigment epithelial cells.台盼蓝对人视网膜色素上皮细胞活力和基因表达的影响。
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Rapid and reliable DNA extraction techniques from trypan-blue-stained mycorrhizal roots: comparison of two methods.
微波辅助技术在根内丛枝菌根真菌的透明和染色中的应用。
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从经台盼蓝染色的菌根根中快速可靠地提取DNA的技术:两种方法的比较。
Mycorrhiza. 2004 Aug;14(4):271-5. doi: 10.1007/s00572-004-0316-3. Epub 2004 Jun 25.
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Diversity of arbuscular mycorrhizal fungi colonising roots of the grass species Agrostis capillaris and Lolium perenne in a field experiment.在一项田间试验中,定殖于禾本科植物细弱剪股颖和多年生黑麦草根系的丛枝菌根真菌的多样性。
Mycorrhiza. 2004 Apr;14(2):111-7. doi: 10.1007/s00572-003-0244-7. Epub 2003 May 24.
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Ink and vinegar, a simple staining technique for arbuscular-mycorrhizal fungi.墨水与醋酸,一种用于丛枝菌根真菌的简单染色技术。
Appl Environ Microbiol. 1998 Dec;64(12):5004-7. doi: 10.1128/AEM.64.12.5004-5007.1998.
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Characterization of root colonization profiles by a microcosm community of arbuscular mycorrhizal fungi using 25S rDNA-targeted nested PCR.利用靶向25S rDNA的巢式PCR对丛枝菌根真菌微观群落的根系定殖情况进行表征。
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7
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