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大肠杆菌外周膜酶丙酮酸氧化酶的膜结合及催化激活的结构基础

Structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from Escherichia coli.

作者信息

Neumann Piotr, Weidner Annett, Pech Andreas, Stubbs Milton T, Tittmann Kai

机构信息

Institute of Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg, Kurt-Mothes Strasse 3, D-06120 Halle/Saale, Germany.

出版信息

Proc Natl Acad Sci U S A. 2008 Nov 11;105(45):17390-5. doi: 10.1073/pnas.0805027105. Epub 2008 Nov 6.

Abstract

The thiamin- and flavin-dependent peripheral membrane enzyme pyruvate oxidase from E. coli catalyzes the oxidative decarboxylation of the central metabolite pyruvate to CO(2) and acetate. Concomitant reduction of the enzyme-bound flavin triggers membrane binding of the C terminus and shuttling of 2 electrons to ubiquinone 8, a membrane-bound mobile carrier of the electron transport chain. Binding to the membrane in vivo or limited proteolysis in vitro stimulate the catalytic proficiency by 2 orders of magnitude. The molecular mechanisms by which membrane binding and activation are governed have remained enigmatic. Here, we present the X-ray crystal structures of the full-length enzyme and a proteolytically activated truncation variant lacking the last 23 C-terminal residues inferred as important in membrane binding. In conjunction with spectroscopic results, the structural data pinpoint a conformational rearrangement upon activation that exposes the autoinhibitory C terminus, thereby freeing the active site. In the activated enzyme, Phe-465 swings into the active site and wires both cofactors for efficient electron transfer. The isolated C terminus, which has no intrinsic helix propensity, folds into a helical structure in the presence of micelles.

摘要

来自大肠杆菌的硫胺素和黄素依赖性外周膜酶丙酮酸氧化酶催化中心代谢物丙酮酸氧化脱羧生成二氧化碳和乙酸盐。酶结合黄素的伴随还原触发了C末端的膜结合,并将2个电子穿梭至泛醌8,泛醌8是电子传递链的膜结合移动载体。体内与膜结合或体外有限的蛋白水解作用可使催化效率提高2个数量级。膜结合和激活的分子机制一直是个谜。在此,我们展示了全长酶和一个蛋白水解激活的截短变体的X射线晶体结构,该变体缺少推断在膜结合中起重要作用的最后23个C末端残基。结合光谱学结果,结构数据确定了激活时的构象重排,该重排暴露了自抑制性C末端,从而释放了活性位点。在激活的酶中,苯丙氨酸-465摆动到活性位点,并连接两个辅因子以实现高效的电子转移。分离的C末端本身没有内在的螺旋倾向,但在存在胶束的情况下会折叠成螺旋结构。

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