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蒺藜苜蓿叶片衰老的转录组分析:与拟南芥、根瘤衰老和一氧化氮信号传导相比,代谢和转录调控方面的异同

Transcriptome analysis of Medicago truncatula leaf senescence: similarities and differences in metabolic and transcriptional regulations as compared with Arabidopsis, nodule senescence and nitric oxide signalling.

作者信息

De Michele Roberto, Formentin Elide, Todesco Marco, Toppo Stefano, Carimi Francesco, Zottini Michela, Barizza Elisabetta, Ferrarini Alberto, Delledonne Massimo, Fontana Paolo, Lo Schiavo Fiorella

机构信息

Dipartimento di Biologia, Università degli Studi di Padova, Via Ugo Bassi 58/B, I-35131 Padova, Italy.

出版信息

New Phytol. 2009;181(3):563-75. doi: 10.1111/j.1469-8137.2008.02684.x. Epub 2008 Nov 17.

Abstract

Here, for the first time, a comprehensive transcriptomics study is presented of leaf senescence in the legume model Medicago truncatula, providing a broad overview of differentially expressed transcripts involved in this process. The cDNA-amplification fragment length polymorphism (AFLP) technique was used to identify > 500 genes, which were cloned and sorted into functional categories according to their gene ontology annotation. Comparison between the datasets of Arabidopsis and M. truncatula leaf senescence reveals common physiological events but differences in the nitrogen metabolism and in transcriptional regulation. In addition, it was observed that a minority of the genes regulated during leaf senescence were equally involved in other processes leading to programmed cell death, such as nodule senescence and nitric oxide signalling. This study provides a wide transcriptional profile for the comprehension of key events of leaf senescence in M. truncatula and highlights a possible regulative role for MADS box transcription factors in the terminal phases of the process.

摘要

本文首次对豆科模式植物蒺藜苜蓿的叶片衰老进行了全面的转录组学研究,概述了参与该过程的差异表达转录本。采用cDNA扩增片段长度多态性(AFLP)技术鉴定了500多个基因,这些基因被克隆并根据其基因本体注释分类到功能类别中。拟南芥和蒺藜苜蓿叶片衰老数据集的比较揭示了共同的生理事件,但在氮代谢和转录调控方面存在差异。此外,研究发现,在叶片衰老过程中受调控的少数基因同样参与导致程序性细胞死亡的其他过程,如根瘤衰老和一氧化氮信号传导。本研究为理解蒺藜苜蓿叶片衰老的关键事件提供了广泛的转录图谱,并突出了MADS盒转录因子在该过程末期可能的调控作用。

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