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通过. 的转录组分析鉴定一个新基因作为叶片衰老的负调控因子

Identification of a Novel Gene as a Negative Regulator of Leaf Senescence through Transcriptome Analysis in .

机构信息

Ministry of Education Key Laboratory of Molecular and Cellular Biology, Hebei Research Center of the Basic Discipline of Cell Biology, Hebei Collaboration Innovation Center for Cell Signaling and Environmental Adaptation, Hebei Key Laboratory of Molecular and Cellular Biology, College of Life Sciences, Hebei Normal University, Shijiazhuang 050024, China.

Department of Plant and Soil Sciences, Institute for Agricultural Biosciences, Oklahoma State University, Ardmore, OK 73401, USA.

出版信息

Int J Mol Sci. 2024 Sep 27;25(19):10410. doi: 10.3390/ijms251910410.

Abstract

Leaves are the primary harvest portion in forage crops such as alfalfa (). Delaying leaf senescence is an effective strategy to improve forage biomass production and quality. In this study, we employed transcriptome sequencing to analyze the transcriptional changes and identify key under age-dependent leaf senescence in , a legume forage model plant. Through comparing the obtained expression data at different time points, we obtained 1057 differentially expressed genes, with 108 consistently up-regulated genes across leaf growth and senescence. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses showed that the 108 mainly related to protein processing, nitrogen metabolism, amino acid metabolism, RNA degradation and plant hormone signal transduction. Among the 108 , seven transcription factors were identified in which a novel bZIP transcription factor MtbZIP60 was proved to inhibit leaf senescence. MtbZIP60 encodes a nuclear-localized protein and possesses transactivation activity. Further study demonstrated MtbZIP60 could associate with MtWRKY40, both of which exhibited an up-regulated expression pattern during leaf senescence, indicating their crucial roles in the regulation of leaf senescence. Our findings help elucidate the molecular mechanisms of leaf senescence in and provide candidates for the genetic improvement of forage crops, with a focus on regulating leaf senescence.

摘要

叶片是紫花苜蓿等饲料作物的主要收获部分。延缓叶片衰老是提高饲料生物量和质量的有效策略。在这项研究中,我们采用转录组测序分析了转录变化,并鉴定了在豆科饲料模式植物拟南芥中叶片衰老过程中的关键基因。通过比较不同时间点获得的表达数据,我们获得了 1057 个差异表达基因,其中 108 个基因在叶片生长和衰老过程中持续上调。基因本体论和京都基因与基因组百科全书通路富集分析表明,这 108 个基因主要与蛋白质加工、氮代谢、氨基酸代谢、RNA 降解和植物激素信号转导有关。在这 108 个基因中,鉴定到了 7 个转录因子,其中一个新的 bZIP 转录因子 MtbZIP60 被证明能抑制叶片衰老。MtbZIP60 编码一个核定位蛋白,具有转录激活活性。进一步的研究表明,MtbZIP60 可以与 MtWRKY40 结合,两者在叶片衰老过程中均表现出上调表达模式,表明它们在叶片衰老调控中具有重要作用。我们的研究结果有助于阐明拟南芥叶片衰老的分子机制,并为饲料作物的遗传改良提供了候选基因,重点是调节叶片衰老。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3906/11477300/0fd19a291192/ijms-25-10410-g001.jpg

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