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酵母细胞周期转录调节因子的系统筛选。

A systematic screen for transcriptional regulators of the yeast cell cycle.

作者信息

White Michael A, Riles Linda, Cohen Barak A

机构信息

Department of Genetics and Center for Genome Sciences, Washington University School of Medicine, St. Louis, Missouri 63108, USA.

出版信息

Genetics. 2009 Feb;181(2):435-46. doi: 10.1534/genetics.108.098145. Epub 2008 Nov 24.

Abstract

Transcription factors play a key role in the regulation of cell cycle progression, yet many of the specific regulatory interactions that control cell cycle transcription are still unknown. To systematically identify new yeast cell cycle transcription factors, we used a quantitative flow cytometry assay to screen 268 transcription factor deletion strains for defects in cell cycle progression. Our results reveal that 20% of nonessential transcription factors have an impact on cell cycle progression, including several recently identified cyclin-dependent kinase (Cdk) targets, which have not previously been linked to cell cycle transcription. This expanded catalog of cell-cycle-associated transcription factors will be a valuable resource for decoding the transcriptional regulatory interactions that govern progression through the cell cycle. We conducted follow-up studies on Sfg1, a transcription factor with no previously known role in cell cycle progression. Deletion of Sfg1 retards cells in G(1), and overexpression of Sfg1 delays cells in the G(2)/M phase. We find that Sfg1 represses early G(1), Swi5/Ace2-regulated genes involved in mother-daughter cell separation. We also show that Sfg1, a known in vitro cyclin-dependent kinase target, is phosphorylated in vivo on conserved Cdk phosphorylation sites and that phosphorylation of Sfg1 is necessary for its role in promoting cell cycle progression. Overall, our work increases the number of transcription factors associated with cell cycle progression, strongly indicates that there are many more unexplored connections between the Cdk-cyclin oscillator and cell cycle transcription, and suggests a new mechanism for the regulation of cell separation during the M/G(1) phase transition.

摘要

转录因子在细胞周期进程的调控中起着关键作用,但许多控制细胞周期转录的具体调控相互作用仍不为人知。为了系统地鉴定新的酵母细胞周期转录因子,我们使用定量流式细胞术检测法,筛选了268个转录因子缺失菌株,以寻找细胞周期进程中的缺陷。我们的结果显示,20%的非必需转录因子对细胞周期进程有影响,其中包括几个最近鉴定出的细胞周期蛋白依赖性激酶(Cdk)靶点,这些靶点以前未与细胞周期转录联系起来。这个扩展的与细胞周期相关的转录因子目录,将成为解码控制细胞周期进程的转录调控相互作用的宝贵资源。我们对Sfg1进行了后续研究,Sfg1是一种以前在细胞周期进程中没有已知作用的转录因子。缺失Sfg1会使细胞在G(1)期延迟,而Sfg1的过表达会使细胞在G(2)/M期延迟。我们发现Sfg1会抑制早期G(1)期、Swi5/Ace2调控的参与母-子细胞分离的基因。我们还表明,Sfg1作为一种已知的体外细胞周期蛋白依赖性激酶靶点,在体内保守的Cdk磷酸化位点上被磷酸化,并且Sfg1的磷酸化对于其促进细胞周期进程的作用是必需的。总体而言,我们的工作增加了与细胞周期进程相关的转录因子数量,有力地表明在Cdk-细胞周期蛋白振荡器和细胞周期转录之间还有更多未被探索的联系,并提出了一种在M/G(1)期转变过程中调控细胞分离的新机制。

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