• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于知识引导的蛋白质热稳定性实验室进化

Knowledge-guided laboratory evolution of protein thermolability.

作者信息

Reetz Manfred T, Soni Pankaj, Fernández Layla

机构信息

Max-Planck-Institut für Kohlenforschung, Mülheim, Germany.

出版信息

Biotechnol Bioeng. 2009 Apr 15;102(6):1712-7. doi: 10.1002/bit.22202.

DOI:10.1002/bit.22202
PMID:19072845
Abstract

In rare but nevertheless important cases it is of practical interest to decrease the thermostability of an enzyme, that is, to increase thermolability in a controlled manner. In the present model study, this unconventional goal has been reached by applying directed evolution to the lipase from Pseudomonas aeruginosa (PAL). By utilizing the B-factor iterative test (B-FIT), previously developed to increase the thermostability of enzymes, it was possible to reduce the T(15)(50) value from 71.6 degrees C in the case of wild type (WT-PAL) to 35.6 degrees C (best mutant) without affecting the catalytic profile in terms of substrate acceptance or enantioselectivity at room temperature. Accordingly, saturation mutagenesis was performed at sites in PAL, which on the basis of its X-ray structure, have the lowest B-factors indicative of high rigidity. Focused mutations were introduced which can be expected to decrease rigidity, the ensuing increased flexibility leading to higher thermolability without changing the actual catalytic profile.

摘要

在罕见但却重要的情况下,降低酶的热稳定性,即以可控方式提高热不稳定性具有实际意义。在当前的模型研究中,通过对铜绿假单胞菌脂肪酶(PAL)进行定向进化实现了这一非传统目标。利用先前开发的用于提高酶热稳定性的B因子迭代测试(B-FIT),能够将野生型(WT-PAL)的T(15)(50)值从71.6℃降至35.6℃(最佳突变体),且不影响室温下底物接受度或对映选择性方面的催化特征。因此,基于PAL的X射线结构,在具有最低B因子(表明高刚性)的位点进行饱和诱变。引入了预期可降低刚性的集中突变,由此增加的灵活性导致更高的热不稳定性,同时不改变实际的催化特征。

相似文献

1
Knowledge-guided laboratory evolution of protein thermolability.基于知识引导的蛋白质热稳定性实验室进化
Biotechnol Bioeng. 2009 Apr 15;102(6):1712-7. doi: 10.1002/bit.22202.
2
Iterative saturation mutagenesis (ISM) for rapid directed evolution of functional enzymes.用于功能性酶快速定向进化的迭代饱和诱变(ISM)
Nat Protoc. 2007;2(4):891-903. doi: 10.1038/nprot.2007.72.
3
Revisiting the lipase from Pseudomonas aeruginosa: directed evolution of substrate acceptance and enantioselectivity using iterative saturation mutagenesis.重新审视铜绿假单胞菌的脂肪酶:利用迭代饱和突变进行底物接受和对映选择性的定向进化。
Chemphyschem. 2011 Jun 6;12(8):1550-7. doi: 10.1002/cphc.201100031. Epub 2011 Apr 5.
4
Iterative saturation mutagenesis accelerates laboratory evolution of enzyme stereoselectivity: rigorous comparison with traditional methods.迭代饱和突变加速酶立体选择性的实验室进化:与传统方法的严格比较。
J Am Chem Soc. 2010 Jul 7;132(26):9144-52. doi: 10.1021/ja1030479.
5
Iterative saturation mutagenesis on the basis of B factors as a strategy for increasing protein thermostability.基于B因子的迭代饱和诱变作为提高蛋白质热稳定性的策略。
Angew Chem Int Ed Engl. 2006 Nov 27;45(46):7745-51. doi: 10.1002/anie.200602795.
6
Changing the enantioselectivity of enzymes by directed evolution.通过定向进化改变酶的对映选择性。
Methods Enzymol. 2004;388:238-56. doi: 10.1016/S0076-6879(04)88021-2.
7
Thermostabilization of an esterase by alignment-guided focussed directed evolution.通过定向进化引导的定点排列来稳定酯酶。
Protein Eng Des Sel. 2010 Dec;23(12):903-9. doi: 10.1093/protein/gzq071. Epub 2010 Oct 14.
8
Biological chemistry: enzymes in focus.生物化学:聚焦酶类
Nature. 2005 Aug 25;436(7054):1096-7. doi: 10.1038/4361096a.
9
Increasing the stability of an enzyme toward hostile organic solvents by directed evolution based on iterative saturation mutagenesis using the B-FIT method.通过基于迭代饱和突变的 B-FIT 方法的定向进化,提高酶对恶劣有机溶剂的稳定性。
Chem Commun (Camb). 2010 Dec 7;46(45):8657-8. doi: 10.1039/c0cc02657c. Epub 2010 Oct 18.
10
Mutations towards enantioselectivity adversely affect secretion of Pseudomonas aeruginosa lipase.对映选择性突变对铜绿假单胞菌脂肪酶的分泌产生不利影响。
FEMS Microbiol Lett. 2008 May;282(1):65-72. doi: 10.1111/j.1574-6968.2008.01107.x. Epub 2008 Mar 18.

引用本文的文献

1
Structure of an Alkaline Pectate Lyase and Rational Engineering with Improved Thermo-Alkaline Stability for Efficient Ramie Degumming.碱性果胶裂解酶的结构及其理性工程改造以提高热碱性稳定性,从而实现高效苎麻脱胶。
Int J Mol Sci. 2022 Dec 29;24(1):538. doi: 10.3390/ijms24010538.
2
Recombination of Compatible Substitutions by 2GenReP and InSiReP.2GenReP 和 InSiReP 的兼容替换重组。
Methods Mol Biol. 2022;2397:71-81. doi: 10.1007/978-1-0716-1826-4_5.
3
Research Advances of d-allulose: An Overview of Physiological Functions, Enzymatic Biotransformation Technologies, and Production Processes.
D-阿洛酮糖的研究进展:生理功能、酶促生物转化技术及生产工艺概述
Foods. 2021 Sep 15;10(9):2186. doi: 10.3390/foods10092186.
4
Significantly improving the thermostability of a hyperthermophilic GH10 family xylanase XynAF1 by semi-rational design.通过半理性设计显著提高嗜热GH10家族木聚糖酶XynAF1的热稳定性
Appl Microbiol Biotechnol. 2021 Jun;105(11):4561-4576. doi: 10.1007/s00253-021-11340-9. Epub 2021 May 20.
5
Computer-Assisted Recombination (CompassR) Teaches us How to Recombine Beneficial Substitutions from Directed Evolution Campaigns.计算机辅助重组(CompassR)教会我们如何从定向进化实验中重组有益的替换。
Chemistry. 2020 Jan 13;26(3):643-649. doi: 10.1002/chem.201903994. Epub 2019 Dec 3.
6
RankProt: A multi criteria-ranking platform to attain protein thermostabilizing mutations and its in vitro applications - Attribute based prediction method on the principles of Analytical Hierarchical Process.RankProt:一种多标准排序平台,用于获得蛋白质热稳定性突变体及其体外应用-基于层次分析法原理的属性预测方法。
PLoS One. 2018 Oct 4;13(10):e0203036. doi: 10.1371/journal.pone.0203036. eCollection 2018.
7
Rational and Semirational Protein Design.理性与半理性蛋白质设计
Methods Mol Biol. 2018;1685:15-23. doi: 10.1007/978-1-4939-7366-8_2.
8
Improvement of biocatalysts for industrial and environmental purposes by saturation mutagenesis.通过饱和突变提高生物催化剂在工业和环境方面的应用。
Biomolecules. 2013 Oct 8;3(4):778-811. doi: 10.3390/biom3040778.
9
Structural analysis on mutation residues and interfacial water molecules for human TIM disease understanding.人类 TIM 疾病理解的突变残基和界面水分子的结构分析。
BMC Bioinformatics. 2013;14 Suppl 16(Suppl 16):S11. doi: 10.1186/1471-2105-14-S16-S11. Epub 2013 Oct 22.
10
A multi-factors rational design strategy for enhancing the thermostability of Escherichia coli AppA phytase.一种增强大肠杆菌 AppA 植酸酶热稳定性的多因素理性设计策略。
J Ind Microbiol Biotechnol. 2013 May;40(5):457-64. doi: 10.1007/s10295-013-1260-z. Epub 2013 Mar 14.