Suppr超能文献

使用热力学模型和蒙特卡洛模拟研究糖萼在纳米载体-细胞黏附中的作用。

The Role of Glycocalyx in Nanocarrier-Cell Adhesion Investigated Using a Thermodynamic Model and Monte Carlo Simulations.

作者信息

Agrawal Neeraj J, Radhakrishnan Ravi

机构信息

Chemical and Biomolecular Engineering and Bioengineering, University of Pennsylvania, 240 Skirkanich Hall, 210 South 33rd Street, Philadelphia, Pennsylvania 19104.

出版信息

J Phys Chem C Nanomater Interfaces. 2007 Nov 1;111(43):15848-15856. doi: 10.1021/jp074514x.

Abstract

We present an equilibrium model for quantifying the effect of glycocalyx in mediating the interaction of functionalized nanocarriers with endothelial cells. In this model, nanocarrier adhesion is governed by the interplay between three physical parameters, namely, glycocalyx resistance, flexural rigidity of receptors, and receptor-ligand bond stiffness. We describe a procedure to rationally determine the values of these crucial parameters based on several independent (single molecule and cell-based) characterizing experiments. Using our model and independent derivation of the parameter values in conjunction with Monte Carlo simulations, we describe the binding of nanocarriers to endothelial cells at equilibrium. We show that we can quantitatively reproduce the experimental binding affinities with zero fitting to binding data. Additionally, our simulations provide quantitative descriptions for the multivalency in nanocarrier binding, as well as for the degree of clustering of antigens. Our study identifies two interesting parameters: glycocalyx resistance and antigen flexural rigidity, both of which reduce binding of nanocarriers and alter the sensitivity of the nanocarrier binding constant to changes in temperature. Collectively, our model, parameter estimations, simulations, and sensitivity analyses help provide unified molecular and energetic analyses of the nanocarrier binding process.

摘要

我们提出了一个平衡模型,用于量化糖萼在介导功能化纳米载体与内皮细胞相互作用中的作用。在该模型中,纳米载体的黏附受三个物理参数之间相互作用的支配,即糖萼阻力、受体的弯曲刚度和受体 - 配体键的刚度。我们描述了一种基于几个独立的(单分子和基于细胞的)表征实验合理确定这些关键参数值的程序。使用我们的模型以及参数值的独立推导并结合蒙特卡罗模拟,我们描述了纳米载体在平衡状态下与内皮细胞的结合。我们表明,我们可以零拟合结合数据来定量重现实验结合亲和力。此外,我们的模拟为纳米载体结合中的多价性以及抗原的聚集程度提供了定量描述。我们的研究确定了两个有趣的参数:糖萼阻力和抗原弯曲刚度,这两个参数都会降低纳米载体的结合并改变纳米载体结合常数对温度变化的敏感性。总体而言,我们的模型、参数估计、模拟和敏感性分析有助于对纳米载体结合过程进行统一的分子和能量分析。

相似文献

引用本文的文献

3
Multiphysics pharmacokinetic model for targeted nanoparticles.靶向纳米颗粒的多物理场药代动力学模型
Front Med Technol. 2022 Jul 15;4:934015. doi: 10.3389/fmedt.2022.934015. eCollection 2022.

本文引用的文献

5
Temperature softening of a protein in single-molecule experiments.单分子实验中蛋白质的温度软化
J Mol Biol. 2005 Nov 25;354(2):497-503. doi: 10.1016/j.jmb.2005.09.070. Epub 2005 Oct 10.
8
Mechanics of receptor-mediated endocytosis.受体介导的内吞作用机制。
Proc Natl Acad Sci U S A. 2005 Jul 5;102(27):9469-74. doi: 10.1073/pnas.0503879102. Epub 2005 Jun 22.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验