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Fly-TILL:利用活体质点突变资源进行反向遗传学研究。

Fly-TILL: reverse genetics using a living point mutation resource.

作者信息

Cooper Jennifer L, Till Bradley J, Henikoff Steven

机构信息

Howard Hughes Medical Institute and Basic Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109-1024, USA.

出版信息

Fly (Austin). 2008 Nov-Dec;2(6):300-2. doi: 10.4161/fly.7366. Epub 2008 Nov 9.

Abstract

Mutagenesis with ethylmethanesulfonate (EMS) has been the standard for traditional genetic screens, and in recent years has been applied to reverse genetics. However, reverse-genetic strategies require maintaining a viable germline library so that mutations that are discovered can subsequently be recovered. In applying our TILLING (Targeting Induced Local Lesions IN Genomes) method to establish a Drosophila reverse-genetic service (Fly-TILL), we chose to screen the Zuker lines, a large collection of EMS-mutagenized second- and third-chromosome balanced lines that had been established for forward-genetic screening. For the past four years, our Fly-TILL service has screened this collection to provide approximately 150 allelic series of point mutations for the fly community. Our analysis of >2000 point mutations and indels have provided a glimpse into the population dynamics of this valuable genetic resource. We found evidence for selection and differential recovery of mutations, depending on distance from balancer breakpoints. Although this process led to variable mutational densities, we have nevertheless been able to deliver potentially valuable mutations in genes selected by Fly-TILL users. We anticipate that our findings will help guide the future implementation of point-mutation resources for the Drosophila community.

摘要

用甲磺酸乙酯(EMS)诱变一直是传统遗传筛选的标准方法,近年来已应用于反向遗传学。然而,反向遗传策略需要维持一个有活力的种系文库,以便后续能够找回发现的突变。在应用我们的TILLING(靶向诱导基因组局部损伤)方法建立果蝇反向遗传服务(Fly-TILL)时,我们选择筛选祖克系,这是一大组为正向遗传筛选而建立的经EMS诱变的第二和第三染色体平衡系。在过去四年里,我们的Fly-TILL服务对这个文库进行了筛选,为果蝇研究群体提供了约150个点突变的等位基因系列。我们对2000多个点突变和插入缺失的分析,让我们得以一窥这个宝贵遗传资源的群体动态。我们发现了根据与平衡染色体断点的距离而进行的选择和突变差异找回的证据。尽管这个过程导致了可变的突变密度,但我们仍然能够提供Fly-TILL用户选择的基因中的潜在有价值突变。我们预计我们的发现将有助于指导果蝇研究群体未来点突变资源的实施。

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