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胡杨几丁质酶基因:结构、组织以及翻译序列与草本植物几丁质酶的相似性

Populus chitinase genes: structure, organization, and similarity of translated sequences to herbaceous plant chitinases.

作者信息

Davis J M, Clarke H R, Bradshaw H D, Gordon M P

机构信息

U.S. Forest Service, North Central Forest Experiment Station, Rhinelander, WI 54501.

出版信息

Plant Mol Biol. 1991 Oct;17(4):631-9. doi: 10.1007/BF00037049.

DOI:10.1007/BF00037049
PMID:1912489
Abstract

Poplar trees have at least two different chitinase genes, win6 and win8, which are systemically wound-inducible and belong to multigene families [Proc Natl Acad Sci USA 86: 7895-7899]. On one genomic clone that we have partially sequenced, there are three win6 genes which are transcriptionally oriented in the same direction. Between two of the win6 genes is a gene that we have designated chitinase X (chiX), which appears to be a pseudogene belonging to a multigene family distinct from win6 and win8. The win6 and chiX genes we have sequenced contain two AT-rich introns that correspond in location to those in a basic chitinase gene from tobacco. The predicted Win6 proteins have a putative signal peptide, a cysteine-rich 'hevein' domain, a hinge region, and a catalytic domain as described in Shinshi et al. [Plant Mol Biol 14: 357-368]. The predicted Win8 protein, by contrast, completely lacks a hinge region. Both Win6 and Win8 are expected to be highly acidic (with a calculated net charge of -15 to -17), whereas ChiX proteins are likely to be basic. Based on an inferred phylogeny, the catalytic domain of ChiX is more closely related to the basic chitinases of herbaceous plants than are either Win6 or Win8.

摘要

杨树至少有两个不同的几丁质酶基因,即win6和win8,它们可被系统性创伤诱导,属于多基因家族[《美国国家科学院院刊》86: 7895 - 7899]。在我们已部分测序的一个基因组克隆上,有三个win6基因,它们的转录方向相同。在其中两个win6基因之间有一个我们命名为几丁质酶X(chiX)的基因,它似乎是一个假基因,属于一个与win6和win8不同的多基因家族。我们测序的win6和chiX基因含有两个富含AT的内含子,其位置与烟草一个基本几丁质酶基因中的内含子相对应。预测的Win6蛋白具有一个假定的信号肽、一个富含半胱氨酸的“橡胶素”结构域、一个铰链区以及如Shinshi等人[《植物分子生物学》14: 357 - 368]所述的催化结构域。相比之下,预测的Win8蛋白完全缺乏铰链区。预计Win6和Win8都呈高酸性(计算得到的净电荷为 - 15至 - 17),而ChiX蛋白可能呈碱性。基于推断的系统发育,ChiX的催化结构域与草本植物的碱性几丁质酶的关系比Win6或Win8与它们的关系更为密切。

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引用本文的文献

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本文引用的文献

1
Identification of an endochitinase cDNA clone from barley aleurone cells.从大麦糊粉层细胞中鉴定出一个内切几丁质酶 cDNA 克隆。
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Isolation and Characterization of the Genes Encoding Basic and Acidic Chitinase in Arabidopsis thaliana.拟南芥碱性和酸性几丁质酶基因的分离与鉴定。
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Molecular cloning, structure and expression of an elicitor-inducible chitinase gene from pine trees.
Plant Mol Biol. 1997 Apr;33(6):979-87. doi: 10.1023/a:1005708611020.
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Bacterial expression of an active class Ib chitinase from Castanea sativa cotyledons.来自欧洲栗种子叶的活性I类几丁质酶的细菌表达。
Plant Mol Biol. 1996 Dec;32(6):1171-6. doi: 10.1007/BF00041402.
8
A family of wound-induced genes in Populus shares common features with genes encoding vegetative storage proteins.杨树中一个伤口诱导基因家族与编码营养贮藏蛋白的基因具有共同特征。
Plant Mol Biol. 1993 Oct;23(1):135-43. doi: 10.1007/BF00021426.
9
Wound-induced and developmental activation of a poplar tree chitinase gene promoter in transgenic tobacco.杨树几丁质酶基因启动子在转基因烟草中的创伤诱导及发育激活
Plant Mol Biol. 1994 Aug;25(5):799-815. doi: 10.1007/BF00028875.
10
Sequence variation, differential expression and chromosomal location of rice chitinase genes.水稻几丁质酶基因的序列变异、差异表达及染色体定位
Mol Gen Genet. 1993 Oct;241(1-2):1-10. doi: 10.1007/BF00280194.
植物病程相关酶的调节:生长素和细胞分裂素对培养烟草组织中几丁质酶和几丁质酶 mRNA 积累的抑制作用。
Proc Natl Acad Sci U S A. 1987 Jan;84(1):89-93. doi: 10.1073/pnas.84.1.89.
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EMBO J. 1986 Mar;5(3):467-73. doi: 10.1002/j.1460-2075.1986.tb04235.x.
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Proc Natl Acad Sci U S A. 1991 Mar 15;88(6):2393-6. doi: 10.1073/pnas.88.6.2393.
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"A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity". Addendum.一种将DNA限制性内切酶片段放射性标记至高比活度的技术。附录
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