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牛副结核病的风险单倍型分析。

Risk haplotype analysis for bovine paratuberculosis.

作者信息

Pinedo Pablo J, Wang Chenguang, Li Yao, Rae D Owen, Wu Rongling

机构信息

Department of Large Animal Clinical Sciences, College of Veterinary Medicine, University of Florida, Gainesville, FL 32611, USA.

出版信息

Mamm Genome. 2009 Feb;20(2):124-9. doi: 10.1007/s00335-008-9167-0. Epub 2009 Jan 15.

DOI:10.1007/s00335-008-9167-0
PMID:19145459
Abstract

Paratuberculosis (Johne's disease), caused by Mycobacterium avium subsp. paratuberculosis, is an important disease for bovines, although its genetic basis is poorly understood. In this study, three candidate genes were typed to study the associations between single nucleotide polymorphisms (SNPs) and paratuberculosis susceptibility (measured in a 1 or 0 form) at the haplotype level. A significant risk haplotype, constructed by a variant allele (C) at the first SNP and a common allele (A) at the second SNP, within the CARD15 gene was detected to trigger genetic effects on paratuberculosis infection in an overdominace manner. Marginally significant haplotypes were identified for the other two genes. The results obtained will provide scientific guidance about the selection and prediction of resistance types in bovines.

摘要

副结核病(约翰氏病)由鸟分枝杆菌副结核亚种引起,是牛的一种重要疾病,尽管其遗传基础尚不清楚。在本研究中,对三个候选基因进行分型,以研究单核苷酸多态性(SNP)与单倍型水平上副结核病易感性(以1或0形式衡量)之间的关联。在CARD15基因内,检测到一个由第一个SNP处的变异等位基因(C)和第二个SNP处的常见等位基因(A)构建的显著风险单倍型,以超显性方式引发对副结核病感染的遗传效应。另外两个基因也鉴定出了边缘显著的单倍型。所获得的结果将为牛抗性类型的选择和预测提供科学指导。

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本文引用的文献

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Candidate gene polymorphisms (BoIFNG, TLR4, SLC11A1) as risk factors for paratuberculosis infection in cattle.候选基因多态性(BoIFNG、TLR4、SLC11A1)作为牛副结核病感染的风险因素。
Prev Vet Med. 2009 Oct 1;91(2-4):189-96. doi: 10.1016/j.prevetmed.2009.05.020. Epub 2009 Jun 13.
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Mapping Nucleotide Sequences that Encode Complex Binary Disease Traits with HapMap.利用 HapMap 绘制编码复杂二元疾病特征的核苷酸序列。
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Association between CARD15/NOD2 gene polymorphisms and paratuberculosis infection in cattle.
荷斯坦-弗里生奶牛副结核病类型的遗传关联分析
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Evolution of the bovine TLR gene family and member associations with Mycobacterium avium subspecies paratuberculosis infection.牛 TLR 基因家族的进化及其与分枝杆菌副结核病感染的成员关联。
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牛CARD15/NOD2基因多态性与副结核病感染之间的关联
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A computational model for sex-specific genetic architecture of complex traits in humans: implications for mapping pain sensitivity.人类复杂性状性别特异性遗传结构的计算模型:对疼痛敏感性映射的启示。
Mol Pain. 2008 Apr 16;4:13. doi: 10.1186/1744-8069-4-13.
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Gut. 2008 Mar;57(3):323-30. doi: 10.1136/gut.2007.133322. Epub 2007 Oct 26.
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