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从内脏利什曼病患者中检测和鉴定一种唾液酸化糖基化细菌ABC型磷酸盐转运蛋白

Detection and characterization of a sialoglycosylated bacterial ABC-type phosphate transporter protein from patients with visceral leishmaniasis.

作者信息

Ghoshal Angana, Mukhopadhyay Sumi, Demine Rodion, Forgber Michael, Jarmalavicius Saulius, Saha Bibhuti, Sundar Shyam, Walden Peter, Mandal Chhabinath, Mandal Chitra

机构信息

Department of Infectious Disease and Immunology, Indian Institute of Chemical Biology, 4 Raja S.C. Mullick Road, Kolkata, 700032, India.

出版信息

Glycoconj J. 2009 Aug;26(6):675-89. doi: 10.1007/s10719-008-9223-8. Epub 2009 Jan 29.

Abstract

We report the discovery and characterization of a glycosylated bacterial ABC-type phosphate transporter isolated from the peripheral blood mononuclear cell (PBMC) fraction of patients with visceral leishmaniasis (VL). Three disease-associated 9-O-acetylated sialoglycoproteins (9-O-AcSGPs) of 19, 56 and 65 kDa, respectively, had been identified and their purity, apparent mass and pI established by SDS-PAGE and isoelectric focusing. Western blot analyses showed that the 9-O-acetylated sialic acid is linked via alpha2-->6 linkage to a subterminal N-acetylgalactosamine. For the 56 kDa protein, N- as well as O-glycosylations were demonstrated by specific glycosidase treatment and found to account for more than 9 kDa of the protein mass. The presence of sialic acids was further confirmed through thin layer chromatography, fluorimetric HPLC and electrospray ionization-mass spectrometry. The protein was identified by mass spectrometry and de novo sequencing of five tryptic fragments as a periplasmic ABC-type phosphate transporter of Pseudomonas aeruginosa. The amino acid sequences of the assigned peptides had 83-100% identity with the NCBI entry for a Pseudomonas transporter protein. Based on the recently reported X-ray structure of a human phosphate-binding protein, we predicted a 3D structural model for the 56 kDa protein using homology and threading methods. The most probable N- and O-glycosylation sites were identified by combinations of sequence motif-searching bioinformatics tools, solvent accessibility calculations, structural environment analyses and mass spectrometric data. This is the first reported glycosylation as well as sialylation of the periplasmic component of an ABC-type phosphate transporter protein and of one of few identified bacterial glycoproteins.

摘要

我们报告了从内脏利什曼病(VL)患者外周血单核细胞(PBMC)组分中分离出的一种糖基化细菌ABC型磷酸盐转运蛋白的发现及特性。已鉴定出三种分别为19 kDa、56 kDa和65 kDa的与疾病相关的9-O-乙酰化唾液酸糖蛋白(9-O-AcSGPs),并通过SDS-PAGE和等电聚焦确定了它们的纯度、表观质量和pI。蛋白质印迹分析表明,9-O-乙酰化唾液酸通过α2→6连接与一个亚末端N-乙酰半乳糖胺相连。对于56 kDa的蛋白质,通过特异性糖苷酶处理证实了N-糖基化和O-糖基化的存在,发现其占蛋白质质量的9 kDa以上。通过薄层色谱、荧光HPLC和电喷雾电离质谱进一步证实了唾液酸的存在。通过对五个胰蛋白酶片段进行质谱分析和从头测序,将该蛋白质鉴定为铜绿假单胞菌的周质ABC型磷酸盐转运蛋白。所分配肽段的氨基酸序列与NCBI中铜绿假单胞菌转运蛋白条目的同一性为83%-100%。基于最近报道的人磷酸盐结合蛋白的X射线结构,我们使用同源性和穿线方法预测了56 kDa蛋白质的三维结构模型。通过序列基序搜索生物信息学工具、溶剂可及性计算、结构环境分析和质谱数据的组合,确定了最可能的N-糖基化和O-糖基化位点。这是首次报道ABC型磷酸盐转运蛋白周质组分的糖基化以及唾液酸化,也是为数不多已鉴定的细菌糖蛋白之一。

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