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1
Understanding and engineering RNA sequence specificity of PUF proteins.
Curr Opin Struct Biol. 2009 Feb;19(1):110-5. doi: 10.1016/j.sbi.2008.12.009. Epub 2009 Jan 29.
2
Divergence of Pumilio/fem-3 mRNA binding factor (PUF) protein specificity through variations in an RNA-binding pocket.
J Biol Chem. 2012 Feb 24;287(9):6949-57. doi: 10.1074/jbc.M111.326264. Epub 2011 Dec 28.
3
Specific and modular binding code for cytosine recognition in Pumilio/FBF (PUF) RNA-binding domains.
J Biol Chem. 2011 Jul 29;286(30):26732-42. doi: 10.1074/jbc.M111.244889. Epub 2011 Jun 8.
4
Expanding the binding specificity for RNA recognition by a PUF domain.
Nat Commun. 2021 Aug 24;12(1):5107. doi: 10.1038/s41467-021-25433-6.
5
Modular recognition of nucleic acids by PUF, TALE and PPR proteins.
Mol Biosyst. 2012 Mar;8(3):699-708. doi: 10.1039/c2mb05392f. Epub 2012 Jan 10.
6
Patterns and plasticity in RNA-protein interactions enable recruitment of multiple proteins through a single site.
Proc Natl Acad Sci U S A. 2012 Apr 17;109(16):6054-9. doi: 10.1073/pnas.1200521109. Epub 2012 Mar 30.
8
Pumilio Puf domain RNA-binding proteins in Arabidopsis.
Plant Signal Behav. 2011 Mar;6(3):364-8. doi: 10.4161/psb.6.3.14380. Epub 2011 Mar 1.
9
A universal code for RNA recognition by PUF proteins.
Nat Chem Biol. 2011 May 15;7(7):425-7. doi: 10.1038/nchembio.577.
10
Bespoke RNA recognition by Pumilios.
Biochem Soc Trans. 2015 Oct;43(5):801-6. doi: 10.1042/BST20150072.

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3
Structural recognition of the mRNA 3' UTR by PUF-8 restricts the lifespan of C. elegans.
Nucleic Acids Res. 2021 Sep 27;49(17):10082-10097. doi: 10.1093/nar/gkab754.
4
Expanding the binding specificity for RNA recognition by a PUF domain.
Nat Commun. 2021 Aug 24;12(1):5107. doi: 10.1038/s41467-021-25433-6.
5
Phosphorylation of PUF-A/PUM3 on Y259 modulates PUF-A stability and cell proliferation.
PLoS One. 2021 Aug 18;16(8):e0256282. doi: 10.1371/journal.pone.0256282. eCollection 2021.
6
Human Pumilio proteins directly bind the CCR4-NOT deadenylase complex to regulate the transcriptome.
RNA. 2021 Apr;27(4):445-464. doi: 10.1261/rna.078436.120. Epub 2021 Jan 4.
7
Roles of the Pumilio domain protein PUF3 in growth and differentiation.
Parasitology. 2020 Sep;147(11):1171-1183. doi: 10.1017/S003118202000092X. Epub 2020 Jun 9.
8
The L motifs of two moss pentatricopeptide repeat proteins are involved in RNA editing but predominantly not in RNA recognition.
PLoS One. 2020 Apr 29;15(4):e0232366. doi: 10.1371/journal.pone.0232366. eCollection 2020.
9
Diverse Roles of PUF Proteins in Germline Stem and Progenitor Cell Development in .
Front Cell Dev Biol. 2020 Feb 6;8:29. doi: 10.3389/fcell.2020.00029. eCollection 2020.
10
A Quantitative and Predictive Model for RNA Binding by Human Pumilio Proteins.
Mol Cell. 2019 Jun 6;74(5):966-981.e18. doi: 10.1016/j.molcel.2019.04.012. Epub 2019 May 8.

本文引用的文献

1
A Caenorhabditis elegans PUF protein family with distinct RNA binding specificity.
RNA. 2008 Aug;14(8):1550-7. doi: 10.1261/rna.1095908. Epub 2008 Jun 25.
2
Ribonomic analysis of human Pum1 reveals cis-trans conservation across species despite evolution of diverse mRNA target sets.
Mol Cell Biol. 2008 Jun;28(12):4093-103. doi: 10.1128/MCB.00155-08. Epub 2008 Apr 14.
3
Structures of human Pumilio with noncognate RNAs reveal molecular mechanisms for binding promiscuity.
Structure. 2008 Apr;16(4):549-57. doi: 10.1016/j.str.2008.01.006. Epub 2008 Mar 6.
4
Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p.
Nat Struct Mol Biol. 2008 Apr;15(4):397-402. doi: 10.1038/nsmb.1390. Epub 2008 Mar 9.
5
Conserved regulation of MAP kinase expression by PUF RNA-binding proteins.
PLoS Genet. 2007 Dec 28;3(12):e233. doi: 10.1371/journal.pgen.0030233.
6
Imaging dynamics of endogenous mitochondrial RNA in single living cells.
Nat Methods. 2007 May;4(5):413-9. doi: 10.1038/nmeth1030. Epub 2007 Apr 1.
7
mRNA regulation by Puf domain proteins.
Sci STKE. 2006 Sep 26;2006(354):pe37. doi: 10.1126/stke.3542006pe37.
8
Engineering RNA sequence specificity of Pumilio repeats.
Proc Natl Acad Sci U S A. 2006 Sep 12;103(37):13635-9. doi: 10.1073/pnas.0606294103. Epub 2006 Sep 5.
9
Genome-wide identification of mRNAs associated with the translational regulator PUMILIO in Drosophila melanogaster.
Proc Natl Acad Sci U S A. 2006 Mar 21;103(12):4487-92. doi: 10.1073/pnas.0509260103. Epub 2006 Mar 13.
10
A single spacer nucleotide determines the specificities of two mRNA regulatory proteins.
Nat Struct Mol Biol. 2005 Nov;12(11):945-51. doi: 10.1038/nsmb1010.

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