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嗜羧寡养菌的CoxD蛋白是一种预测的AAA+ATP酶伴侣蛋白,参与一氧化碳脱氢酶[CuSMoO2]簇的生物合成。

The CoxD protein of Oligotropha carboxidovorans is a predicted AAA+ ATPase chaperone involved in the biogenesis of the CO dehydrogenase [CuSMoO2] cluster.

作者信息

Pelzmann Astrid, Ferner Marion, Gnida Manuel, Meyer-Klaucke Wolfram, Maisel Tobias, Meyer Ortwin

机构信息

University of Bayreuth, Universitätsstrasse 30, Bayreuth 95440, Germany.

出版信息

J Biol Chem. 2009 Apr 3;284(14):9578-86. doi: 10.1074/jbc.M805354200. Epub 2009 Feb 2.

DOI:10.1074/jbc.M805354200
PMID:19189964
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2666610/
Abstract

CO dehydrogenase from the Gram-negative chemolithoautotrophic eubacterium Oligotropha carboxidovorans OM5 is a structurally characterized molybdenum-containing iron-sulfur flavoenzyme, which catalyzes the oxidation of CO (CO + H(2)O --> CO(2) + 2e(-) + 2H(+)). It accommodates in its active site a unique bimetallic [CuSMoO(2)] cluster, which is subject to post-translational maturation. Insertional mutagenesis of coxD has established its requirement for the assembly of the [CuSMoO(2)] cluster. Disruption of coxD led to a phenotype of the corresponding mutant OM5 D::km with the following characteristics: (i) It was impaired in the utilization of CO, whereas the utilization of H(2) plus CO(2) was not affected; (ii) Under appropriate induction conditions bacteria synthesized a fully assembled apo-CO dehydrogenase, which could not oxidize CO; (iii) Apo-CO dehydrogenase contained a [MoO(3)] site in place of the [CuSMoO(2)] cluster; and (iv) Employing sodium sulfide first and then the Cu(I)-(thiourea)(3) complex, the non-catalytic [MoO(3)] site could be reconstituted in vitro to a [CuSMoO(2)] cluster capable of oxidizing CO. Sequence information suggests that CoxD is a MoxR-like AAA+ ATPase chaperone related to the hexameric, ring-shaped BchI component of Mg(2+)-chelatases. Recombinant CoxD, which appeared in Escherichia coli in inclusion bodies, occurs exclusively in cytoplasmic membranes of O. carboxidovorans grown in the presence of CO, and its occurrence coincided with GTPase activity upon sucrose density gradient centrifugation of cell extracts. The presumed function of CoxD is the partial unfolding of apo-CO dehydrogenase to assist in the stepwise introduction of sulfur and copper in the [MoO(3)] center of the enzyme.

摘要

来自革兰氏阴性化能无机自养真细菌嗜羧寡养单胞菌OM5的一氧化碳脱氢酶是一种结构已得到表征的含钼铁硫黄素酶,它催化一氧化碳的氧化反应(CO + H₂O → CO₂ + 2e⁻ + 2H⁺)。其活性位点容纳一个独特的双金属[CuSMoO₂]簇,该簇会经历翻译后成熟过程。coxD的插入诱变已确定其对于[CuSMoO₂]簇组装的必要性。coxD的破坏导致相应突变体OM5 D::km具有以下特征的表型:(i)其利用CO的能力受损,而H₂加CO₂的利用不受影响;(ii)在适当的诱导条件下,细菌合成了完全组装好的脱辅基一氧化碳脱氢酶,该酶无法氧化CO;(iii)脱辅基一氧化碳脱氢酶含有一个[MoO₃]位点,取代了[CuSMoO₂]簇;(iv)先使用硫化钠,然后使用Cu(I)-(硫脲)₃络合物,非催化性的[MoO₃]位点可在体外重构成能够氧化CO的[CuSMoO₂]簇。序列信息表明CoxD是一种与Mg²⁺螯合酶的六聚体环状BchI组分相关的MoxR样AAA⁺ ATP酶伴侣蛋白。在大肠杆菌中以包涵体形式出现的重组CoxD仅存在于在CO存在下生长的嗜羧寡养单胞菌的细胞质膜中,并且在对细胞提取物进行蔗糖密度梯度离心时,其出现与GTP酶活性一致。CoxD的推测功能是使脱辅基一氧化碳脱氢酶部分展开,以协助在该酶的[MoO₃]中心逐步引入硫和铜。

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1
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J Bacteriol. 2008 Aug;190(15):5531-2. doi: 10.1128/JB.00614-08. Epub 2008 Jun 6.
2
Biosynthesis of the iron-molybdenum cofactor of nitrogenase.固氮酶铁钼辅因子的生物合成
Annu Rev Microbiol. 2008;62:93-111. doi: 10.1146/annurev.micro.62.081307.162737.
3
The mechanism of assembly and cofactor insertion into Rhodobacter capsulatus xanthine dehydrogenase.荚膜红细菌黄嘌呤脱氢酶的组装及辅因子插入机制。
J Biol Chem. 2008 Jun 13;283(24):16602-11. doi: 10.1074/jbc.M709894200. Epub 2008 Apr 6.
4
Transfer of the molybdenum cofactor synthesized by Rhodobacter capsulatus MoeA to XdhC and MobA.由荚膜红细菌MoeA合成的钼辅因子向XdhC和MobA的转移。
J Biol Chem. 2007 Sep 28;282(39):28493-28500. doi: 10.1074/jbc.M704020200. Epub 2007 Aug 7.
5
Identification of a Rhodobacter capsulatus L-cysteine desulfurase that sulfurates the molybdenum cofactor when bound to XdhC and before its insertion into xanthine dehydrogenase.鉴定一种荚膜红细菌L-半胱氨酸脱硫酶,该酶在与XdhC结合时且在其插入黄嘌呤脱氢酶之前使钼辅因子硫酸化。
Biochemistry. 2007 Aug 21;46(33):9586-95. doi: 10.1021/bi700630p. Epub 2007 Jul 25.
6
MoxR AAA+ ATPases: a novel family of molecular chaperones?MoxR AAA+ ATP酶:一类新型分子伴侣?
J Struct Biol. 2006 Oct;156(1):200-9. doi: 10.1016/j.jsb.2006.02.009. Epub 2006 Mar 23.
7
Structural and functional reconstruction in situ of the [CuSMoO2] active site of carbon monoxide dehydrogenase from the carbon monoxide oxidizing eubacterium Oligotropha carboxidovorans.来自一氧化碳氧化真细菌嗜羧寡养单胞菌的一氧化碳脱氢酶[CuSMoO₂]活性位点的原位结构与功能重建
J Biol Inorg Chem. 2005 Aug;10(5):518-28. doi: 10.1007/s00775-005-0006-4. Epub 2005 Sep 23.
8
AAA+ proteins: have engine, will work.AAA+蛋白:有动力,就能发挥作用。
Nat Rev Mol Cell Biol. 2005 Jul;6(7):519-29. doi: 10.1038/nrm1684.
9
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J Struct Biol. 2004 Apr-May;146(1-2):227-33. doi: 10.1016/j.jsb.2003.11.019.
10
Formation and insertion of the nitrogenase iron-molybdenum cofactor.固氮酶铁钼辅因子的形成与插入
Chem Rev. 2004 Feb;104(2):1159-73. doi: 10.1021/cr020608l.