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来自假单胞菌属T62的磷酸吡哆醛依赖性L-苏式-3-羟基天冬氨酸脱水酶的基因克隆、表达及重组酶的特性分析

Gene cloning and expression of pyridoxal 5'-phosphate-dependent L-threo-3-hydroxyaspartate dehydratase from Pseudomonas sp. T62, and characterization of the recombinant enzyme.

作者信息

Murakami Tomoko, Maeda Takayuki, Yokota Atsushi, Wada Masaru

机构信息

Division of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University, Sapporo, Japan.

出版信息

J Biochem. 2009 May;145(5):661-8. doi: 10.1093/jb/mvp023. Epub 2009 Feb 4.

Abstract

L-threo-3-Hydroxyaspartate dehydratase (L-THA DH, EC 4.3.1.16), which catalyses the cleavage of L-threo-3-hydroxyaspartate (L-THA) to oxalacetate and ammonia, has been purified from the soil bacterium Pseudomonas sp. T62. In this report, the gene encoding L-THA DH was cloned and expressed in Escherichia coli, and the gene product was purified and characterized in detail. A 957-bp nucleotide fragment was confirmed to be the gene encoding L-THA DH, based on the agreement of internal amino acid sequences. The deduced amino acid sequence, which belongs to the serine/threonine dehydratase family, shows similarity to YKL218c from Saccharomyces cerevisiae (64%), serine racemase from Schizosaccharomyces pombe (64%) and Mus musculus (36%), and biodegradative threonine dehydratase from E. coli (38%). Site-directed mutagenesis experiments revealed that lysine at position 53 is an important residue for enzymatic activity. This enzyme exhibited dehydratase activity specific only to L-THA [K(m) = 0.54 mM, V(max) = 39.0 micromol min(-1) (mg protein)(-1)], but not to other 3-hydroxyaspartate isomers, and exhibited no detectable serine/aspartate racemase activity. This is the first report of an amino acid sequence of the bacterial enzyme that acts on L-THA.

摘要

L-苏型-3-羟基天冬氨酸脱水酶(L-THA DH,EC 4.3.1.16)可催化L-苏型-3-羟基天冬氨酸(L-THA)裂解生成草酰乙酸和氨,已从土壤细菌假单胞菌属T62中纯化得到。在本报告中,编码L-THA DH的基因被克隆并在大肠杆菌中表达,对该基因产物进行了纯化及详细表征。基于内部氨基酸序列的一致性,确认一个957 bp的核苷酸片段为编码L-THA DH的基因。推导的氨基酸序列属于丝氨酸/苏氨酸脱水酶家族,与酿酒酵母的YKL218c(64%)、粟酒裂殖酵母和小家鼠的丝氨酸消旋酶(64%)以及大肠杆菌的生物降解性苏氨酸脱水酶(38%)具有相似性。定点诱变实验表明,53位的赖氨酸是酶活性的重要残基。该酶仅对L-THA表现出脱水酶活性[K(m)=0.54 mM,V(max)=39.0 μmol min(-1)(mg蛋白)(-1)],对其他3-羟基天冬氨酸异构体无活性,且未检测到丝氨酸/天冬氨酸消旋酶活性。这是关于作用于L-THA的细菌酶氨基酸序列的首次报道。

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