Matsumoto Yu, Yasutake Yoshiaki, Takeda Yuki, Tamura Tomohiro, Yokota Atsushi, Wada Masaru
Laboratory of Microbial Physiology, Research Faculty of Agriculture, Hokkaido University, Kita-9, Nishi-9, Kita-ku, Sapporo 060-8589, Japan.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Oct;69(Pt 10):1131-4. doi: 10.1107/S1744309113023956. Epub 2013 Sep 28.
D-threo-3-Hydroxyaspartate dehydratase (D-THA DH) isolated from the soil bacterium Delftia sp. HT23 is a novel enzyme consisting of 380 amino-acid residues which catalyzes the conversion of D-threo-3-hydroxyaspartate to oxaloacetate and ammonia. D-THA DH also catalyzes the dehydration of L-threo-3-hydroxyaspartate, L-erythro-3-hydroxyaspartate and D-serine. The amino-acid sequence of D-THA DH shows significant similarity to that of two eukaryotic D-serine dehydratases derived from Saccharomyces cerevisiae and chicken kidney. D-THA DH is classified into the fold-type III group of pyridoxal enzymes and is the first example of a fold-type III dehydratase derived from a prokaryote. Overexpression of recombinant D-THA DH was carried out using a Rhodococcus erythropolis expression system and the obtained protein was subsequently purified and crystallized. The crystals of D-THA DH belonged to space group I4₁22, with unit-cell parameters a=b=157.3, c=157.9 Å. Single-wavelength anomalous diffraction data were collected to a resolution of 2.0 Å using synchrotron radiation at the wavelength of the Br K absorption edge.
从土壤细菌代尔夫特菌属菌株HT23中分离出的D-苏式-3-羟基天冬氨酸脱水酶(D-THA DH)是一种由380个氨基酸残基组成的新型酶,它催化D-苏式-3-羟基天冬氨酸转化为草酰乙酸和氨。D-THA DH还催化L-苏式-3-羟基天冬氨酸、L-赤式-3-羟基天冬氨酸和D-丝氨酸的脱水反应。D-THA DH的氨基酸序列与源自酿酒酵母和鸡肾的两种真核D-丝氨酸脱水酶的氨基酸序列具有显著相似性。D-THA DH被归类为吡哆醛酶的折叠型III组,是源自原核生物的折叠型III脱水酶的首个实例。使用红平红球菌表达系统进行重组D-THA DH的过表达,随后对获得的蛋白质进行纯化和结晶。D-THA DH的晶体属于空间群I4₁22,晶胞参数a = b = 157.3,c = 157.9 Å。利用溴的K吸收边波长的同步辐射收集了分辨率为2.0 Å的单波长反常衍射数据。