Sánchez-Porro Cristina, de la Haba Rafael R, Soto-Ramírez Nelis, Márquez M Carmen, Montalvo-Rodríguez Rafael, Ventosa Antonio
Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Sevilla, 41012 Sevilla, Spain.
Int J Syst Evol Microbiol. 2009 Feb;59(Pt 2):397-405. doi: 10.1099/ijs.0.001461-0.
An aerobic, moderately halophilic, Gram-negative, motile, non-sporulating rod-shaped bacterium, designated strain A10(T), was isolated from the surface of leaves of the black mangrove Avicennia germinans and was subjected to a polyphasic taxonomic study. Strain A10(T) was able to grow at NaCl concentrations in the range 5-17.5 % (w/v) with optimum growth at 10 % (w/v) NaCl. Growth occurred at temperatures of 20-40 degrees C (optimal growth at 37 degrees C) and pH 5.5-8.5 (optimal growth at pH 7.0-8.0). The major respiratory quinone was ubiquinone 9. The major fatty acids were C(16 : 0), C(18 : 1)omega7c, C(19 : 0) cyclo omega8c and C(12 : 0) 3-OH. The polar lipids were phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine, and unidentified phospholipids, glycolipids and an aminoglycolipid. Phylogenetic analysis based on 16S rRNA gene sequence comparisons revealed that strain A10(T) is closely related to Halomonas avicenniae MW2a(T) (95.7 % sequence similarity), Halomonas marisflavi SW32(T) (95.2 %) and Halomonas indalinina GC2.1(T) (95.0 %). Strain A10(T) formed a coherent phylogenetic branch with these three species, separated from other species of Halomonas and closely related genera (with 16S rRNA gene sequence similarities below 94.0 %). A complete 23S rRNA gene sequence comparison of strain A10(T) with closely related species confirmed the phylogenetic position of the novel isolate, forming a branch with the species Halomonas avicenniae, Halomonas indalinina and Halomonas marisflavi, separated from other species of the genera belonging to the family Halomonadaceae (showing sequence similarities below 91.7 %). DNA-DNA hybridization studies between strain A10(T) and Halomonas avicenniae MW2a(T), Halomonas marisflavi DSM 15357(T) and Halomonas indalinina CG2.1(T) were 21, 17 and 10 %, respectively. These levels of DNA-DNA relatedness were low enough to classify strain A10(T) as representing a genotypically distinct species. Overall, the phenotypic, genotypic, chemotaxonomic and phylogenetic results demonstrated that strain A10(T) represents a new genus and species. The name Kushneria aurantia gen. nov., sp. nov. is proposed, with strain A10(T) (=CCM 7415(T)=CECT 7220(T)) as the type strain. This is the type species of the new proposed genus, which belongs to the family Halomonadaceae. In addition, our data support the placement of the species Halomonas marisflavi, Halomonas indalinina and Halomonas avicenniae within this new genus, as Kushneria marisflavi comb. nov., Kushneria indalinina comb. nov. and Kushneria avicenniae comb. nov., respectively.
从黑红树白骨壤(Avicennia germinans)叶片表面分离出一株需氧、中度嗜盐、革兰氏阴性、具运动性、不产芽孢的杆状细菌,命名为菌株A10(T),并对其进行了多相分类研究。菌株A10(T)能够在5-17.5%(w/v)的NaCl浓度范围内生长,在10%(w/v)NaCl条件下生长最佳。在20-40℃(37℃生长最佳)和pH 5.5-8.5(pH 7.0-8.0生长最佳)条件下可生长。主要呼吸醌为泛醌9。主要脂肪酸为C(16 : 0)、C(18 : 1)ω7c、C(19 : 0)环ω8c和C(12 : 0) 3-OH。极性脂类为磷脂酰甘油、双磷脂酰甘油、磷脂酰乙醇胺以及未鉴定的磷脂、糖脂和一种氨基糖脂。基于16S rRNA基因序列比较的系统发育分析表明,菌株A10(T)与盐单胞菌(Halomonas avicenniae)MW2a(T)(序列相似性95.7%)、海黄单胞菌(Halomonas marisflavi)SW32(T)(95.2%)和印达盐单胞菌(Halomonas indalinina)GC2.1(T)(95.0%)密切相关。菌株A10(T)与这三个物种形成一个连贯的系统发育分支,与盐单胞菌属的其他物种及密切相关属分开(16S rRNA基因序列相似性低于94.0%)。菌株A10(T)与密切相关物种的完整23S rRNA基因序列比较证实了该新分离菌株的系统发育位置,与盐单胞菌属的盐单胞菌、印达盐单胞菌和海黄单胞菌形成一个分支,与盐单胞菌科其他属的物种分开(序列相似性低于91.7%)。菌株A10(T)与盐单胞菌MW2a(T)、海黄单胞菌DSM 15357(T)和印达盐单胞菌CG2.1(T)之间的DNA-DNA杂交研究分别为21%、17%和10%。这些DNA-DNA相关性水平低到足以将菌株A10(T)归类为代表一个基因型不同的物种。总体而言,表型、基因型、化学分类和系统发育结果表明,菌株A10(T)代表一个新的属和种。提出新属名Kushneria aurantia gen. nov.,新种名Kushneria aurantia sp. nov.,以菌株A10(T)(=CCM 7415(T)=CECT 7220(T))作为模式菌株。这是新提出属的模式种,属于盐单胞菌科。此外,我们的数据支持将海黄单胞菌、印达盐单胞菌和盐单胞菌这三个物种归入这个新属,分别命名为海黄库什纳菌(Kushneria marisflavi comb. nov.)、印达库什纳菌(Kushneria indalinina comb. nov.)和白骨壤库什纳菌(Kushneria avicenniae comb. nov.)。