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河口阿利氏菌新种,从潮滩沉积物中分离得到,以及阿利氏菌属的修订描述。

Alishewanella aestuarii sp. nov., isolated from tidal flat sediment, and emended description of the genus Alishewanella.

作者信息

Roh Seong Woon, Nam Young-Do, Chang Ho-Won, Kim Kyoung-Ho, Kim Min-Soo, Oh Hee-Mock, Bae Jin-Woo

机构信息

University of Science & Technology, 52, Eoeun-dong, Daejeon 305-333, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2009 Feb;59(Pt 2):421-4. doi: 10.1099/ijs.0.65643-0.

Abstract

A Gram-negative strain, B11(T), was isolated from tidal flat sediment in Yeosu, Republic of Korea. Strain B11(T) did not require NaCl for growth and grew between 18 and 44 degrees C. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain B11(T) was associated with the genus Alishewanella and was closely related to the type strain of Alishewanella fetalis (98.3 % similarity). Within the phylogenetic tree, the novel isolate shared a branching point with A. fetalis. Analysis of 16S rRNA gene sequences and DNA-DNA relatedness, as well as physiological and biochemical tests, indicated genotypic and phenotypic differences between strain B11(T) and the type strain of A. fetalis. Thus, strain B11(T) is proposed as a representative of a novel species, Alishewanella aestuarii sp. nov.; the type strain is B11(T) (=KCTC 22051(T) =DSM 19476(T)).

摘要

从韩国丽水的潮滩沉积物中分离出一株革兰氏阴性菌B11(T)。菌株B11(T)生长不需要氯化钠,生长温度范围为18至44摄氏度。基于16S rRNA基因序列的系统发育分析表明,菌株B11(T)与阿氏希瓦氏菌属相关,与胎儿阿氏希瓦氏菌模式菌株密切相关(相似度为98.3%)。在系统发育树中,该新分离株与胎儿阿氏希瓦氏菌共有一个分支点。16S rRNA基因序列分析、DNA-DNA相关性分析以及生理生化测试表明,菌株B11(T)与胎儿阿氏希瓦氏菌模式菌株在基因型和表型上存在差异。因此,提议将菌株B11(T)作为一个新物种——河口阿氏希瓦氏菌(Alishewanella aestuarii sp. nov.)的代表;模式菌株为B11(T)(=KCTC 22051(T)=DSM 19476(T))。

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