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上埃及(南部)人群中15个常染色体STR基因座的遗传变异

Genetic variation of 15 autosomal STR loci in Upper (Southern) Egyptians.

作者信息

Omran Ghada A, Rutty Guy N, Jobling Mark A

机构信息

East Midlands Forensic Pathology Unit, University of Leicester, Robert Kilpatrick Clinical Sciences Building, Leicester Royal Infirmary, Leicester LE2 7LX, UK.

出版信息

Forensic Sci Int Genet. 2009 Mar;3(2):e39-44. doi: 10.1016/j.fsigen.2008.05.007. Epub 2008 Jul 2.

DOI:10.1016/j.fsigen.2008.05.007
PMID:19215865
Abstract

A sample of 265 unrelated individuals inhabiting five governorates in Upper (south) Egypt was collected with informed consent. The samples were amplified using the AmpFlSTR IdentifilerPCR Amplification Kit (containing 15 loci: D8S1179, D21S11, D7S820, CSF1PO, D3S1358, TH01, D13S317, D16S539, D2S1338, D19S433, vWA, TPOX, D18S51, D5S818 and FGA), and genotyped subsequent to capillary electrophoresis. Statistical analysis of the generated data indicated neither departure from expectation of Hardy-Weinberg Equilibrium (HWE) in most of the tested loci nor dependence of alleles between loci. All tested loci were polymorphic; the most discriminating is D18S51 while the least is TPOX. The combined power of exclusion was 0.99999868 and the combined match probability was 1.93x10(-18). The genetic diversity of the Upper Egyptians was compared with those of other populations at the local, regional and global levels.

摘要

在获得知情同意后,采集了居住在埃及上埃及(南部)五个省份的265名无血缘关系个体的样本。使用AmpFlSTR IdentifilerPCR扩增试剂盒(包含15个基因座:D8S1179、D21S11、D7S820、CSF1PO、D3S1358、TH01、D13S317、D16S539、D2S1338、D19S433、vWA、TPOX、D18S51、D5S818和FGA)对样本进行扩增,并在毛细管电泳后进行基因分型。对生成数据的统计分析表明,在大多数测试基因座中,既未偏离哈迪-温伯格平衡(HWE)预期,基因座之间的等位基因也不存在依赖性。所有测试基因座均具有多态性;鉴别力最强的是D18S51,最弱的是TPOX。联合排除概率为0.99999868,联合匹配概率为1.93×10(-18)。将上埃及人的遗传多样性与当地、区域和全球层面的其他人群进行了比较。

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