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基于常染色体 STR 的摩洛哥苏斯地区柏柏尔人族群的遗传特征分析。

Genetic characterization of the Berber-speaking population of Souss (Morocco) based on autosomal STRs.

机构信息

Laboratory of Health Sciences and Technologies, Higher Institute of Health Sciences, Hassan First University of Settat, Settat, Morocco.

Faculty of Sciences, Mohammed V Agdal University, Rabat, Morocco.

出版信息

Mol Genet Genomic Med. 2023 Jun;11(6):e2156. doi: 10.1002/mgg3.2156. Epub 2023 Feb 27.

Abstract

BACKGROUND

The Souss, located in southern Morocco, is one of the oldest areas of human settlement in North Africa. Despite this historical relevance, the Souss has not received sufficient attention in terms of population genetic studies.

METHODS

In this study, we utilized the AmpFlSTR Identifiler PCR amplification system to establish the allelic frequencies and statistical parameters of 15 autosomal STRs (Short Tandem Repeats) in 150 healthy unrelated Berber-speaking individuals from the Souss. We explored the genetic relationships between Souss and other reference populations based on our dataset as well as previously published population data.

RESULTS

A total of 210 alleles were detected with corresponding allele frequencies ranging from 0.003 to 0.367. The most polymorphic locus was D18S51 with 23 alleles which was also the most discriminating locus as expected. The phylogenetic analysis clustered the Souss closer to the Azrou and southern Moroccan populations. The population comparison showed affinity between the Souss and most North African populations, as well as with Middle Easterners and Europeans.

CONCLUSION

Historical events and geographical proximity have contributed to the affinity between the Souss and surrounding North African, Southern European, and Middle Eastern populations. Overall, this study highlights the reliability of the 15 STRs for identifying individuals and assessing paternity in the Souss population.

摘要

背景

苏斯位于摩洛哥南部,是北非最古老的人类聚居区之一。尽管具有如此悠久的历史,但苏斯人在人口遗传研究方面并未受到足够的关注。

方法

本研究采用 AmpFlSTR Identifiler PCR 扩增系统,对 150 名来自苏斯的健康、无亲缘关系的柏柏尔语人群中的 15 个常染色体 STR(短串联重复序列)进行了等位基因频率和统计参数的分析。我们基于自己的数据集以及先前发表的人口数据,探讨了苏斯人与其他参考人群之间的遗传关系。

结果

共检测到 210 个等位基因,相应的等位基因频率范围为 0.003 至 0.367。最具多态性的基因座是 D18S51,有 23 个等位基因,符合预期,该基因座也是最具判别力的基因座。系统发生分析将苏斯人与阿兹鲁和摩洛哥南部人群聚类在一起。人群比较显示,苏斯人与大多数北非人群以及中东人和欧洲人具有亲缘关系。

结论

历史事件和地理位置的接近促成了苏斯人与周围北非、南欧和中东人群的亲缘关系。总的来说,本研究强调了 15 个 STR 用于识别个体和评估苏斯人亲权关系的可靠性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdd8/10265100/98fb36d19d7f/MGG3-11-e2156-g002.jpg

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