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制备异源双链增强型绿色荧光蛋白质粒,用于体内错配修复活性测定。

Preparation of heteroduplex enhanced green fluorescent protein plasmid for in vivo mismatch repair activity assay.

机构信息

Institute of Watershed Science and Environmental Ecology, Wenzhou Medical College, 325035 Wenzhou, People's Republic of China.

出版信息

Anal Biochem. 2009 May 1;388(1):167-9. doi: 10.1016/j.ab.2009.02.020. Epub 2009 Feb 25.

DOI:10.1016/j.ab.2009.02.020
PMID:19248754
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2670966/
Abstract

Preparation of heteroduplexes in large quantities with high purity is essential for the measurement of DNA mismatch repair (MMR) activity. Here we report a rapid, less labor-intensive method for the preparation of a heteroduplex plasmid that expresses the enhanced green fluorescent protein (EGFP) if the mismatch is repaired correctly. The method involves the use of a wild-type and a mutated EGFP expression plasmid and a few steps of enzymatic digestion. When the constructed heteroduplex EGFP plasmid was transfected into MMR-proficient and -deficient cell lines, the number of EGFP-expressing cells was much higher in the MMR-proficient cells than in the MMR-deficient cells, suggesting that the heteroduplex can be used for MMR activity assay in live model systems.

摘要

大量制备具有高纯度的异源双链体对于测量 DNA 错配修复 (MMR) 活性至关重要。在这里,我们报告了一种快速、劳动强度较小的方法,用于制备异源双链体质粒,如果错配得到正确修复,该质粒会表达增强型绿色荧光蛋白 (EGFP)。该方法涉及使用野生型和突变型 EGFP 表达质粒以及几个酶切步骤。当构建的异源双链体 EGFP 质粒转染到 MMR 功能正常和功能缺失的细胞系中时,在 MMR 功能正常的细胞中表达 EGFP 的细胞数量远高于 MMR 功能缺失的细胞,这表明异源双链体可用于活细胞模型系统中的 MMR 活性测定。

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本文引用的文献

1
Mechanisms and functions of DNA mismatch repair.DNA错配修复的机制与功能
Cell Res. 2008 Jan;18(1):85-98. doi: 10.1038/cr.2007.115.
2
DNA mismatch repair.DNA错配修复
Annu Rev Biochem. 2005;74:681-710. doi: 10.1146/annurev.biochem.74.082803.133243.
3
Measurement of DNA mismatch repair activity in live cells.活细胞中DNA错配修复活性的测量。
Elife. 2022 Oct 3;11:e79128. doi: 10.7554/eLife.79128.
4
DNA Damage and Repair Deficiency in ALS/FTD-Associated Neurodegeneration: From Molecular Mechanisms to Therapeutic Implication.肌萎缩侧索硬化症/额颞叶痴呆相关神经退行性变中的DNA损伤与修复缺陷:从分子机制到治疗意义
Front Mol Neurosci. 2021 Dec 16;14:784361. doi: 10.3389/fnmol.2021.784361. eCollection 2021.
5
FANCD2-Associated Nuclease 1 Partially Compensates for the Lack of Exonuclease 1 in Mismatch Repair.FANCD2 相关核酸内切酶 1 部分补偿错配修复中外切核酸酶 1 的缺失。
Mol Cell Biol. 2021 Aug 24;41(9):e0030321. doi: 10.1128/MCB.00303-21.
6
Helraiser intermediates provide insight into the mechanism of eukaryotic replicative transposition.Helraiser 中间体为真核复制转座的机制提供了线索。
Nat Commun. 2018 Mar 29;9(1):1278. doi: 10.1038/s41467-018-03688-w.
7
Fluorescent Probes of DNA Repair.DNA 修复的荧光探针。
ACS Chem Biol. 2018 Jul 20;13(7):1721-1733. doi: 10.1021/acschembio.7b00919. Epub 2017 Nov 30.
8
The CREB Coactivator CRTC2 Is a Lymphoma Tumor Suppressor that Preserves Genome Integrity through Transcription of DNA Mismatch Repair Genes.CREB 共激活因子 CRTC2 是一种淋巴瘤肿瘤抑制因子,它通过转录 DNA 错配修复基因来维持基因组完整性。
Cell Rep. 2015 Jun 9;11(9):1350-7. doi: 10.1016/j.celrep.2015.04.052. Epub 2015 May 21.
9
Exo1 independent DNA mismatch repair involves multiple compensatory nucleases.外切酶1非依赖性DNA错配修复涉及多种补偿性核酸酶。
DNA Repair (Amst). 2014 Sep;21:55-64. doi: 10.1016/j.dnarep.2014.06.005. Epub 2014 Jul 15.
10
Human pluripotent stem cells have a novel mismatch repair-dependent damage response.人类多能干细胞具有一种新型的错配修复依赖性损伤反应。
J Biol Chem. 2014 Aug 29;289(35):24314-24. doi: 10.1074/jbc.M114.570937. Epub 2014 Jul 10.
Nucleic Acids Res. 2004 Jul 12;32(12):e100. doi: 10.1093/nar/gnh098.
4
An efficient method for the preparation of long heteroduplex DNA as substrate for mismatch repair by the Escherichia coli MutHLS system.一种制备长异源双链DNA作为大肠杆菌MutHLS系统错配修复底物的有效方法。
Biol Chem. 2002 Sep;383(9):1459-62. doi: 10.1515/BC.2002.166.
5
Mismatch repair in human nuclear extracts. Quantitative analyses of excision of nicked circular mismatched DNA substrates, constructed by a new technique employing synthetic oligonucleotides.人核提取物中的错配修复。通过一种采用合成寡核苷酸的新技术构建的带切口环状错配DNA底物切除的定量分析。
J Biol Chem. 2002 Jul 19;277(29):26136-42. doi: 10.1074/jbc.M200357200. Epub 2002 May 10.
6
Construction and characterization of mismatch-containing circular DNA molecules competent for assessment of nick-directed human mismatch repair in vitro.用于体外评估切口导向的人类错配修复的含错配环状DNA分子的构建与表征。
Nucleic Acids Res. 2002 Feb 1;30(3):E14. doi: 10.1093/nar/30.3.e14.
7
Mammalian DNA mismatch repair.哺乳动物DNA错配修复
Annu Rev Genet. 1999;33:533-64. doi: 10.1146/annurev.genet.33.1.533.
8
Preparation of heteroduplex DNA containing a mismatch base pair with magnetic beads.用磁珠制备含有错配碱基对的异源双链DNA。
Anal Biochem. 1999 Nov 1;275(1):127-9. doi: 10.1006/abio.1999.4296.
9
Mismatch repair assay.
Methods Mol Biol. 1999;113:121-32. doi: 10.1385/1-59259-675-4:121.
10
Modification of a PCR-based site-directed mutagenesis method.基于聚合酶链式反应的定点诱变方法的改进。
Biotechniques. 1997 Oct;23(4):570-1, 574. doi: 10.2144/97234bm01.