• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

拟南芥春化作用相关蛋白VERNALIZATION1(208 - 341)的表达、纯化及初步X射线衍射研究

Expression, purification and preliminary X-ray diffraction studies of VERNALIZATION1(208-341) from Arabidopsis thaliana.

作者信息

King Gordon, Hill Justine M, Martin Jennifer L, Mylne Joshua S

机构信息

Institute for Molecular Bioscience, The University of Queensland, Brisbane, Australia.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Mar 1;65(Pt 3):291-4. doi: 10.1107/S1744309109004217. Epub 2009 Feb 26.

DOI:10.1107/S1744309109004217
PMID:19255487
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2650445/
Abstract

VERNALIZATION1 (VRN1) is required in the model plant Arabidopsis thaliana for the epigenetic suppression of the floral repressor FLC by prolonged cold treatment. Stable suppression of FLC accelerates flowering, a physiological process known as vernalization. VRN1 is a 341-residue DNA-binding protein that contains two plant-specific B3 domains (B3a and B3b), a putative nuclear localization sequence (NLS) and two putative PEST domains. VRN1(208-341) includes the second B3 domain and a region upstream that is highly conserved in the VRN1 orthologues of other dicotyledonous plants. VRN1(208-341) was crystallized by the hanging-drop method in 0.05 M sodium acetate pH 6.0 containing 1.0 M NaCl and 18%(w/v) PEG 3350. Preliminary X-ray diffraction data analysis revealed that the VRN1(208-341) crystal diffracted to 2.1 A and belonged to space group C2, with unit-cell parameters a = 105.2, b = 47.9, c = 61.2 A, alpha = 90.0, beta = 115.4, gamma = 90.0 degrees . Assuming that two molecules occupy the asymmetric unit, a Matthews coefficient of 2.05 A(3) Da(-1) and a solvent content of 40.1% were calculated.

摘要

在模式植物拟南芥中,春化作用1(VRN1)是通过长时间的低温处理对开花抑制因子FLC进行表观遗传抑制所必需的。FLC的稳定抑制加速开花,这一生理过程被称为春化作用。VRN1是一种由341个氨基酸残基组成的DNA结合蛋白,包含两个植物特有的B3结构域(B3a和B3b)、一个假定的核定位序列(NLS)和两个假定的PEST结构域。VRN1(208 - 341)包括第二个B3结构域以及在其他双子叶植物的VRN1直系同源物中高度保守的上游区域。VRN1(208 - 341)通过悬滴法在含有1.0 M NaCl和18%(w/v)PEG 3350的0.05 M醋酸钠pH 6.0溶液中结晶。初步的X射线衍射数据分析表明,VRN1(208 - 341)晶体的衍射极限为2.1 Å,属于空间群C2,晶胞参数为a = 105.2,b = 47.9,c = 61.2 Å,α = 90.0,β = 115.4,γ = 90.0°。假设不对称单元中有两个分子,则计算出的马修斯系数为2.05 ų Da⁻¹,溶剂含量为40.1%。

相似文献

1
Expression, purification and preliminary X-ray diffraction studies of VERNALIZATION1(208-341) from Arabidopsis thaliana.拟南芥春化作用相关蛋白VERNALIZATION1(208 - 341)的表达、纯化及初步X射线衍射研究
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Mar 1;65(Pt 3):291-4. doi: 10.1107/S1744309109004217. Epub 2009 Feb 26.
2
The Arabidopsis B3 domain protein VERNALIZATION1 (VRN1) is involved in processes essential for development, with structural and mutational studies revealing its DNA-binding surface.拟南芥 B3 结构域蛋白 VERNALIZATION1(VRN1)参与了对发育至关重要的过程,结构和突变研究揭示了其 DNA 结合表面。
J Biol Chem. 2013 Feb 1;288(5):3198-207. doi: 10.1074/jbc.M112.438572. Epub 2012 Dec 19.
3
NMR assignment and secondary structure of the C-terminal DNA binding domain of Arabidopsis thaliana VERNALIZATION1.拟南芥春化1蛋白C端DNA结合结构域的核磁共振 assignments及二级结构
Biomol NMR Assign. 2012 Apr;6(1):5-8. doi: 10.1007/s12104-011-9313-6. Epub 2011 May 8.
4
Structural insight into the role of VAL1 B3 domain for targeting to FLC locus in Arabidopsis thaliana.解析 VAL1 B3 结构域在拟南芥靶向 FLC 基因座中的作用。
Biochem Biophys Res Commun. 2018 Jun 22;501(2):415-422. doi: 10.1016/j.bbrc.2018.05.002. Epub 2018 May 10.
5
Vernalization-induced flowering in cereals is associated with changes in histone methylation at the VERNALIZATION1 gene.谷类作物中春化诱导的开花与春化基因1(VERNALIZATION1)处组蛋白甲基化的变化有关。
Proc Natl Acad Sci U S A. 2009 May 19;106(20):8386-91. doi: 10.1073/pnas.0903566106. Epub 2009 May 4.
6
Multiple roles of Arabidopsis VRN1 in vernalization and flowering time control.拟南芥VRN1在春化作用和开花时间控制中的多重作用
Science. 2002 Jul 12;297(5579):243-6. doi: 10.1126/science.1072147.
7
Mechanism of DNA-Induced Phase Separation for Transcriptional Repressor VRN1.DNA 诱导转录阻遏物 VRN1 相分离的机制。
Angew Chem Int Ed Engl. 2019 Apr 1;58(15):4858-4862. doi: 10.1002/anie.201810373. Epub 2019 Mar 12.
8
Ectodomain of plasmodesmata-localized protein 5 in Arabidopsis: expression, purification, crystallization and crystallographic analysis.拟南芥中胞间连丝定位蛋白5的胞外结构域:表达、纯化、结晶及晶体学分析
Acta Crystallogr F Struct Biol Commun. 2017 Sep 1;73(Pt 9):532-535. doi: 10.1107/S2053230X1701250X. Epub 2017 Aug 31.
9
Quantitative effects of vernalization on FLC and SOC1 expression.春化作用对FLC和SOC1表达的定量影响。
Plant J. 2006 Mar;45(6):871-83. doi: 10.1111/j.1365-313X.2006.02652.x.
10
Cloning, purification, crystallization and preliminary X-ray analysis of the receiver domain of the histidine kinase CKI1 from Arabidopsis thaliana.拟南芥组氨酸激酶CKI1受体结构域的克隆、纯化、结晶及初步X射线分析。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 May 1;65(Pt 5):478-81. doi: 10.1107/S1744309109012032. Epub 2009 Apr 24.

引用本文的文献

1
The Arabidopsis B3 domain protein VERNALIZATION1 (VRN1) is involved in processes essential for development, with structural and mutational studies revealing its DNA-binding surface.拟南芥 B3 结构域蛋白 VERNALIZATION1(VRN1)参与了对发育至关重要的过程,结构和突变研究揭示了其 DNA 结合表面。
J Biol Chem. 2013 Feb 1;288(5):3198-207. doi: 10.1074/jbc.M112.438572. Epub 2012 Dec 19.

本文引用的文献

1
A PHD-polycomb repressive complex 2 triggers the epigenetic silencing of FLC during vernalization.一个PHD-多梳抑制复合物2在春化过程中触发FLC的表观遗传沉默。
Proc Natl Acad Sci U S A. 2008 Nov 4;105(44):16831-6. doi: 10.1073/pnas.0808687105. Epub 2008 Oct 14.
2
The PHD finger protein VRN5 functions in the epigenetic silencing of Arabidopsis FLC.PHD指蛋白VRN5在拟南芥FLC的表观遗传沉默中发挥作用。
Curr Biol. 2007 Jan 9;17(1):73-8. doi: 10.1016/j.cub.2006.11.052. Epub 2006 Dec 14.
3
Solving structures of protein complexes by molecular replacement with Phaser.使用Phaser通过分子置换法解析蛋白质复合物的结构。
Acta Crystallogr D Biol Crystallogr. 2007 Jan;63(Pt 1):32-41. doi: 10.1107/S0907444906045975. Epub 2006 Dec 13.
4
A PHD finger protein involved in both the vernalization and photoperiod pathways in Arabidopsis.一种参与拟南芥春化和光周期途径的博士指蛋白。
Genes Dev. 2006 Dec 1;20(23):3244-8. doi: 10.1101/gad.1493306. Epub 2006 Nov 17.
5
Epigenetic maintenance of the vernalized state in Arabidopsis thaliana requires LIKE HETEROCHROMATIN PROTEIN 1.拟南芥春化状态的表观遗传维持需要类异染色质蛋白1。
Nat Genet. 2006 Jun;38(6):706-10. doi: 10.1038/ng1795. Epub 2006 May 7.
6
LHP1, the Arabidopsis homologue of HETEROCHROMATIN PROTEIN1, is required for epigenetic silencing of FLC.LHP1是拟南芥中与异染色质蛋白1同源的蛋白,它是FLC表观遗传沉默所必需的。
Proc Natl Acad Sci U S A. 2006 Mar 28;103(13):5012-7. doi: 10.1073/pnas.0507427103. Epub 2006 Mar 20.
7
Structure of the B3 domain from Arabidopsis thaliana protein At1g16640.来自拟南芥蛋白At1g16640的B3结构域的结构。
Protein Sci. 2005 Sep;14(9):2478-83. doi: 10.1110/ps.051606305. Epub 2005 Aug 4.
8
Solution structure of the B3 DNA binding domain of the Arabidopsis cold-responsive transcription factor RAV1.拟南芥冷响应转录因子RAV1的B3 DNA结合结构域的溶液结构
Plant Cell. 2004 Dec;16(12):3448-59. doi: 10.1105/tpc.104.026112. Epub 2004 Nov 17.
9
Vernalization requires epigenetic silencing of FLC by histone methylation.春化作用需要通过组蛋白甲基化对FLC进行表观遗传沉默。
Nature. 2004 Jan 8;427(6970):164-7. doi: 10.1038/nature02269.
10
Vernalization in Arabidopsis thaliana is mediated by the PHD finger protein VIN3.拟南芥中的春化作用由含植物同源结构域(PHD)的蛋白VIN3介导。
Nature. 2004 Jan 8;427(6970):159-64. doi: 10.1038/nature02195.