Song Nan, Liang Aiping
Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China.
Acta Biochim Biophys Sin (Shanghai). 2009 Mar;41(3):206-16. doi: 10.1093/abbs/gmp003.
The complete nucleotide sequence of the mitochondrial genome (mitogenome) of Geisha distinctissima (Hemiptera: Flatidae) has been determined in this study. The genome is a circular molecule of 15,971 bp with a total A+T content of 75.1%. The gene content, order, and structure are consistent with the Drosophila yakuba genome structure and the hypothesized ancestral arthropod genome arrangement. All 13 protein-coding genes are observed to have a putative, inframe ATR methionine or ATT isoleucine codons as start signals. Canonical TAA and TAG termination codons are found in nine protein-coding genes, and the remaining four (cox1, atp6, cox3, and nad4) have incomplete termination codons. The anticodons of all transfer RNA (tRNAs) are identical to those observed in D. yakuba and Philaenus spumarius, and can be folded in the form of a typical clover-leaf structure except for tRNA(Ser(AGN)). The major non-coding region (the A+T-rich region or putative control region) between the small ribosomal subunit and the tRNA(Ile) gene includes two sets of repeat regions. The first repeat region consists of a direct 152-bp repetitive unit located near the srRNA gene end, and the second repeat region is composed of a direct repeat unit of 19 bp located toward tRNA(Ile) gene. Comparisons of gene variability across the order suggest that the gene content and arrangement of G. distinctissima mitogenome are similar to other hemipteran insects.
本研究测定了显纹广翅蜡蝉(半翅目:广翅蜡蝉科)线粒体基因组(线粒体基因组)的完整核苷酸序列。该基因组是一个15971 bp的环状分子,A+T总含量为75.1%。基因内容、顺序和结构与雅库布果蝇基因组结构以及假定的节肢动物祖先基因组排列一致。观察到所有13个蛋白质编码基因都有一个推定的、框内的ATR甲硫氨酸或ATT异亮氨酸密码子作为起始信号。在9个蛋白质编码基因中发现了典型的TAA和TAG终止密码子,其余4个(cox1、atp6、cox3和nad4)具有不完全终止密码子。所有转运RNA(tRNA)的反密码子与在雅库布果蝇和沫蝉中观察到的相同,除了tRNA(Ser(AGN))外,都可以折叠成典型的三叶草叶结构。小核糖体亚基和tRNA(Ile)基因之间的主要非编码区(富含A+T的区域或假定的控制区)包括两组重复区域。第一个重复区域由位于srRNA基因末端附近的一个152 bp的直接重复单元组成,第二个重复区域由一个朝向tRNA(Ile)基因的19 bp直接重复单元组成。对整个目基因变异性的比较表明,显纹广翅蜡蝉线粒体基因组的基因内容和排列与其他半翅目昆虫相似。