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本文引用的文献

1
Practical experience with the maintenance and auditing of a large medical ontology.大型医学本体维护与审核的实践经验
J Biomed Inform. 2009 Jun;42(3):494-503. doi: 10.1016/j.jbi.2009.03.005. Epub 2009 Mar 12.
2
Using WordNet synonym substitution to enhance UMLS source integration.使用WordNet同义词替换来增强UMLS源整合。
Artif Intell Med. 2009 Jun;46(2):97-109. doi: 10.1016/j.artmed.2008.11.008. Epub 2008 Dec 30.
3
Auditing complex concepts in overlapping subsets of SNOMED.审核医学系统命名法(SNOMED)重叠子集中的复杂概念。
AMIA Annu Symp Proc. 2008 Nov 6;2008:273-7.
4
Modeling multi-typed structurally viewed chemicals with the UMLS Refined Semantic Network.使用统一医学语言系统(UMLS)精炼语义网络对多类型结构化学物质进行建模。
J Am Med Inform Assoc. 2009 Jan-Feb;16(1):116-31. doi: 10.1197/jamia.M2604. Epub 2008 Oct 24.
5
A comparison of two methods for retrieving ICD-9-CM data: The effect of using an ontology-based method for handling terminology changes.两种检索ICD-9-CM数据方法的比较:使用基于本体的方法处理术语变化的效果。
AMIA Annu Symp Proc. 2007 Oct 11;2007:841-5.
6
Decompositional terminology translation using network analysis.使用网络分析的分解术语翻译
AMIA Annu Symp Proc. 2007 Oct 11;2007:588-92.
7
Piecewise synonyms for enhanced UMLS source terminology integration.用于增强UMLS源术语集成的分段同义词。
AMIA Annu Symp Proc. 2007 Oct 11;2007:339-43.
8
Analysis of error concentrations in SNOMED.SNOMED中错误集中情况的分析。
AMIA Annu Symp Proc. 2007 Oct 11;2007:314-8.
9
Evaluation of a UMLS Auditing Process of Semantic Type Assignments.统一医学语言系统语义类型分配审核流程的评估
AMIA Annu Symp Proc. 2007 Oct 11;2007:294-8.
10
Structural group auditing of a UMLS semantic type's extent.统一医学语言系统(UMLS)语义类型范围的结构组审核。
J Biomed Inform. 2009 Feb;42(1):41-52. doi: 10.1016/j.jbi.2008.06.001. Epub 2008 Jun 17.

对应用于受控生物医学术语内容的审核方法的综述。

A review of auditing methods applied to the content of controlled biomedical terminologies.

作者信息

Zhu Xinxin, Fan Jung-Wei, Baorto David M, Weng Chunhua, Cimino James J

机构信息

Department of Biomedical Informatics, Columbia University, 622 West 168th Street, VC-5, New York, NY 10032, USA.

出版信息

J Biomed Inform. 2009 Jun;42(3):413-25. doi: 10.1016/j.jbi.2009.03.003. Epub 2009 Mar 12.

DOI:10.1016/j.jbi.2009.03.003
PMID:19285571
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3505841/
Abstract

Although controlled biomedical terminologies have been with us for centuries, it is only in the last couple of decades that close attention has been paid to the quality of these terminologies. The result of this attention has been the development of auditing methods that apply formal methods to assessing whether terminologies are complete and accurate. We have performed an extensive literature review to identify published descriptions of these methods and have created a framework for characterizing them. The framework considers manual, systematic and heuristic methods that use knowledge (within or external to the terminology) to measure quality factors of different aspects of the terminology content (terms, semantic classification, and semantic relationships). The quality factors examined included concept orientation, consistency, non-redundancy, soundness and comprehensive coverage. We reviewed 130 studies that were retrieved based on keyword search on publications in PubMed, and present our assessment of how they fit into our framework. We also identify which terminologies have been audited with the methods and provide examples to illustrate each part of the framework.

摘要

尽管受控生物医学术语已经存在了几个世纪,但直到最近几十年,人们才开始密切关注这些术语的质量。这种关注的结果是开发了审计方法,这些方法应用形式化方法来评估术语是否完整和准确。我们进行了广泛的文献综述,以识别这些方法的已发表描述,并创建了一个对其进行表征的框架。该框架考虑了手动、系统和启发式方法,这些方法使用(术语内部或外部的)知识来衡量术语内容不同方面(术语、语义分类和语义关系)的质量因素。所考察的质量因素包括概念导向、一致性、无冗余性、合理性和全面覆盖性。我们回顾了基于在PubMed上对出版物进行关键词搜索而检索到的130项研究,并展示了我们对它们如何符合我们框架的评估。我们还确定了哪些术语已经使用这些方法进行了审计,并提供示例来说明框架的每个部分。