Savelsbergh Andreas, Rodnina Marina V, Wintermeyer Wolfgang
Institute of Molecular Biology, University of Witten/Herdecke, 58448 Witten, Germany.
RNA. 2009 May;15(5):772-80. doi: 10.1261/rna.1592509. Epub 2009 Mar 26.
Elongation factor G (EF-G) promotes the translocation step in bacterial protein synthesis and, together with ribosome recycling factor (RRF), the disassembly of the post-termination ribosome. Unlike translocation, ribosome disassembly strictly requires GTP hydrolysis by EF-G. Here we report that ribosome disassembly is strongly inhibited by vanadate, an analog of inorganic phosphate (Pi), indicating that Pi release is required for ribosome disassembly. In contrast, the function of EF-G in single-round translocation is not affected by vanadate, while the turnover reaction is strongly inhibited. We also show that the antibiotic fusidic acid blocks ribosome disassembly by EF-G/RRF at a 1000-fold lower concentration than required for the inhibition of EF-G turnover in vitro and close to the effective inhibitory concentration in vivo, suggesting that the antimicrobial activity of fusidic acid is primarily due to the direct inhibition of ribosome recycling. Our results indicate that conformational coupling between EF-G and the ribosome is principally different in translocation and ribosome disassembly. Pi release is not required for the mechanochemical function of EF-G in translocation, whereas the interactions between RRF and EF-G introduce tight coupling between the conformational change of EF-G induced by Pi release and ribosome disassembly.
延伸因子G(EF-G)促进细菌蛋白质合成中的转位步骤,并与核糖体循环因子(RRF)一起促进终止后核糖体的解体。与转位不同,核糖体解体严格需要EF-G水解GTP。我们在此报告,钒酸盐(一种无机磷酸盐(Pi)类似物)强烈抑制核糖体解体,这表明核糖体解体需要释放Pi。相比之下,钒酸盐不影响EF-G在单轮转位中的功能,但强烈抑制周转反应。我们还表明,抗生素夫西地酸以比体外抑制EF-G周转所需浓度低1000倍且接近体内有效抑制浓度的浓度阻断EF-G/RRF介导的核糖体解体,这表明夫西地酸的抗菌活性主要归因于对核糖体循环的直接抑制。我们的结果表明,EF-G与核糖体之间的构象偶联在转位和核糖体解体过程中存在根本差异。Pi释放对于EF-G在转位中的机械化学功能不是必需的,而RRF与EF-G之间的相互作用在Pi释放诱导的EF-G构象变化与核糖体解体之间引入了紧密偶联。