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从室内艺术品和空气环境中分离的微生物群落研究:鉴定、生物降解能力及DNA分型

Investigation of microbial community isolated from indoor artworks and air environment: identification, biodegradative abilities, and DNA typing.

作者信息

Pangallo Domenico, Chovanová Katarina, Simonovicová Alexandra, Ferianc Peter

机构信息

Institute of Molecular Biology, Slovak Academy of Sciences, Dubravska cesta 21, SK-84551 Bratislava, Slovakia.

出版信息

Can J Microbiol. 2009 Mar;55(3):277-87. doi: 10.1139/w08-136.

Abstract

This study deals with establishing the characteristics of a microbial community isolated from indoor artworks and the surrounding air environment. It is one of the few studies on microbial degradation of indoor artworks. It shows the potential biodegradative risk that can occur if artworks are not exhibited and conserved in an appropriate environment. The microbial community isolated from the indoor artworks and air environment was examined by cultural and molecular methods. Different plate assays were used to screen the biodegradative activity of the isolated microflora: Remazol Brilliant Blue R, phenol red, and Azure B for the ligninolytic properties; Ostazin brilliant red H-3B for cellulose degradation; CaCO3 glucose agar for solubilization activity; and B4 agar for biomineralization. To type the bacterial and fungal isolates, 2 PCR methods, repetitive extragenic palindromes (REP) and random amplified microsatellite polymorphisms (RAMP) were used. The art objects were principally colonized by fungi. The most commonly isolated strains were represented by hyphomycetes of the genera Penicillium, Aspergillus, Cladosporium, and Chaetomium. Members of these genera showed intensive biodegradation activity, both on wood and on stone. Bacteria were predominant in the air, exhibiting complex communities, both in the air and on the artworks. The most frequently isolated genera were Bacillus and Staphylococcus with extensive biodegradation abilities. REP-PCR revealed high variability within strains belonging to the same genus. RAMP is a new PCR-based method, used in this research for the first time to cluster the microfilamentous fungi and to characterize and select especially Penicillium and Aspergillus strains, which were isolated in a large number.

摘要

本研究旨在确定从室内艺术品及其周围空气环境中分离出的微生物群落的特征。这是为数不多的关于室内艺术品微生物降解的研究之一。它表明了如果艺术品不在适宜的环境中展示和保存可能发生的潜在生物降解风险。通过培养和分子方法对从室内艺术品和空气环境中分离出的微生物群落进行了检测。使用不同的平板检测方法筛选分离出的微生物群落的生物降解活性:用瑞马唑啉亮蓝R、酚红和天青B检测木质素分解特性;用奥司他明亮红H-3B检测纤维素降解;用碳酸钙葡萄糖琼脂检测溶解活性;用B4琼脂检测生物矿化。为了对细菌和真菌分离株进行分型,使用了两种聚合酶链反应(PCR)方法,即重复外显子回文序列(REP)和随机扩增多态性微卫星(RAMP)。艺术品主要被真菌定殖。最常分离出的菌株为青霉属、曲霉属、枝孢属和毛壳菌属的丝孢菌。这些属的成员在木材和石材上均表现出强烈的生物降解活性。细菌在空气中占主导地位,在空气和艺术品上均呈现出复杂的群落。最常分离出的属是具有广泛生物降解能力的芽孢杆菌属和葡萄球菌属。REP-PCR揭示了同一属内菌株的高度变异性。RAMP是一种新的基于PCR的方法,本研究首次使用该方法对丝状真菌进行聚类,并对大量分离出的青霉属和曲霉属菌株进行表征和筛选。

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