Maruthamuthu Venkat, Schulten Klaus, Leckband Deborah
Department of Chemical and Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Biophys J. 2009 Apr 22;96(8):3005-14. doi: 10.1016/j.bpj.2008.12.3936.
The neural cell adhesion molecule (NCAM) plays an important role in nervous system development. NCAM forms a complex between its terminal domains Ig1 and Ig2. When NCAM of cell A and of cell B connect to each other through complexes Ig12(A)/Ig12(B), the relative mobility of cells A and B and membrane tension exerts a force on the Ig12(A)/Ig12(B) complex. In this study, we investigated the response of the complex to force, using steered molecular dynamics. Starting from the structure of the complex from the Ig1-Ig2-Ig3 fragment, we first demonstrated that the complex, which differs in dimensions from a previous structure from the Ig1-Ig2 fragment in the crystal environment, assumes the same extension when equilibrated in solvent. We then showed that, when the Ig12(A)/Ig12(B) complex is pulled apart with forces 30-70 pN, it exhibits elastic behavior (with a spring constant of approximately 0.03 N/m) because of the relative reorientation of domains Ig1 and Ig2. At higher forces, the complex ruptures; i.e., Ig12(A) and Ig12(B) separate. The interfacial interactions between Ig12(A) and Ig12(B), monitored throughout elastic extension and rupture, identify E16, F19, K98, and L175 as key side chains stabilizing the complex.
神经细胞黏附分子(NCAM)在神经系统发育中发挥着重要作用。NCAM在其末端结构域Ig1和Ig2之间形成复合物。当细胞A和细胞B的NCAM通过复合物Ig12(A)/Ig12(B)相互连接时,细胞A和细胞B的相对迁移率以及膜张力会对Ig12(A)/Ig12(B)复合物施加力。在本研究中,我们使用引导分子动力学研究了该复合物对力的响应。从Ig1-Ig2-Ig3片段的复合物结构出发,我们首先证明,该复合物在尺寸上与晶体环境中Ig1-Ig2片段的先前结构不同,在溶剂中平衡时具有相同的伸展程度。然后我们表明,当Ig12(A)/Ig12(B)复合物以30 - 70 pN的力拉开时,由于结构域Ig1和Ig2的相对重新定向,它表现出弹性行为(弹簧常数约为0.03 N/m)。在更高的力作用下,复合物会断裂,即Ig12(A)和Ig12(B)分离。在整个弹性伸展和断裂过程中监测到的Ig12(A)和Ig12(B)之间的界面相互作用,确定E16、F19、K98和L175为稳定该复合物的关键侧链。