• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过硅胶中组合文库的“珠外”高通量筛选鉴定催化肽树枝状大分子。

Identification of catalytic Peptide dendrimers by "off-bead" in silica high-throughput screening of combinatorial libraries.

作者信息

Maillard Noélie, Darbre Tamis, Reymond Jean-Louis

机构信息

Department of Chemistry and Biochemistry, University of Berne, Freiestrasse 3, Berne, Switzerland.

出版信息

J Comb Chem. 2009 Jul-Aug;11(4):667-75. doi: 10.1021/cc9000289.

DOI:10.1021/cc9000289
PMID:19408949
Abstract

A combinatorial library of up to 65'536 peptide dendrimers (AcX(8)X(7))(8)(DapX(6)X(5))(4)(DapX(4)X(3))(2)DapX(2)X(1) (Dap = (S)-2,3-diaminopropionic acid branching point, X(8-1) = groups of four proteinogenic l-amino acids) was prepared on a photocleavable tentagel resin. The library was assayed for catalytic hydrolysis of the fluorogenic substrate 1-butyryloxy-pyrene-2,7,8-trisulfonate 1 and analogs by a simple procedure involving (a) photocleavage from the support in the absence of solvent, (b) spreading of the solid support beads on the surface of a silicagel plate impregnated with an aqueous buffered substrate solution, and (c) identification of hits as beads surrounded by a fluorescent halo indicative of catalysis and sequence determination in hits and nonhits by amino acid analysis of the beads. The experiment provides direct access to structure-activity relationships in the library and delivers active esterase dendrimers. Anionic glutamate residues in the outer dendrimer branches were found to inhibit catalysis by histidine residues at the dendrimer core. The "off-bead" in silica assay is simple to implement and transferable to other library and reaction types.

摘要

在光可裂解的帐篷凝胶树脂上制备了一个包含多达65536种肽树枝状聚合物(AcX(8)X(7))(8)(DapX(6)X(5))(4)(DapX(4)X(3))(2)DapX(2)X(1)(Dap = (S)-2,3-二氨基丙酸分支点,X(8 - 1) = 四组蛋白质ogenic l-氨基酸)的组合文库。通过一个简单的程序对该文库进行了荧光底物1-丁酰氧基芘-2,7,8-三磺酸盐1及其类似物的催化水解测定,该程序包括:(a) 在无溶剂条件下从载体上进行光裂解;(b) 将固体载体珠粒铺展在浸渍有缓冲底物水溶液的硅胶板表面;(c) 将产生荧光晕圈(表明有催化作用)的珠粒鉴定为活性物质,并通过对珠粒的氨基酸分析确定活性物质和非活性物质的序列。该实验直接揭示了文库中的构效关系,并得到了具有活性的酯酶树枝状聚合物。发现树枝状聚合物外层分支中的阴离子谷氨酸残基会抑制树枝状聚合物核心处组氨酸残基的催化作用。硅胶板上的“离珠”测定法易于实施,且可应用于其他文库和反应类型。

相似文献

1
Identification of catalytic Peptide dendrimers by "off-bead" in silica high-throughput screening of combinatorial libraries.通过硅胶中组合文库的“珠外”高通量筛选鉴定催化肽树枝状大分子。
J Comb Chem. 2009 Jul-Aug;11(4):667-75. doi: 10.1021/cc9000289.
2
Combinatorial synthesis, selection, and properties of esterase peptide dendrimers.酯酶肽树枝状大分子的组合合成、筛选及性质
Biopolymers. 2006;84(1):114-23. doi: 10.1002/bip.20394.
3
A peptide dendrimer enzyme model with a single catalytic site at the core.一种在核心处具有单个催化位点的肽树枝状大分子酶模型。
J Am Chem Soc. 2007 Oct 31;129(43):13238-46. doi: 10.1021/ja074115f. Epub 2007 Oct 9.
4
Synthesis and activity of histidine-containing catalytic peptide dendrimers.含组氨酸催化肽树枝状大分子的合成与活性
J Org Chem. 2006 Jun 9;71(12):4468-80. doi: 10.1021/jo060273y.
5
Artificial aldolases from peptide dendrimer combinatorial libraries.来自肽树枝状聚合物组合文库的人工醛缩酶。
Org Biomol Chem. 2006 Sep 7;4(17):3268-81. doi: 10.1039/b607342e. Epub 2006 Jul 26.
6
Combinatorial discovery of peptide dendrimer enzyme models hydrolyzing isobutyryl fluorescein.组合发现肽树状大分子酶模型水解异丁酰荧光素。
ACS Comb Sci. 2011 May 9;13(3):310-20. doi: 10.1021/co200006z. Epub 2011 Apr 13.
7
Combinatorial libraries of peptide dendrimers: design, synthesis, on-bead high-throughput screening, bead decoding and characterization.肽树枝状大分子组合文库:设计、合成、珠上高通量筛选、珠解码与表征
Nat Protoc. 2009;4(2):132-42. doi: 10.1038/nprot.2008.241.
8
Synthesis and esterolytic activity of catalytic peptide dendrimers.催化肽树枝状大分子的合成与酯解活性
Chemistry. 2004 Mar 5;10(5):1215-26. doi: 10.1002/chem.200305578.
9
Peptide dendrimers as artificial enzymes, receptors, and drug-delivery agents.肽树枝状大分子作为人工酶、受体和药物递送剂。
Acc Chem Res. 2006 Dec;39(12):925-34. doi: 10.1021/ar050203y.
10
The one-bead two-compound assay for solid phase screening of combinatorial libraries.用于组合文库固相筛选的单珠双化合物分析方法。
Biopolymers. 2002;66(2):93-100. doi: 10.1002/bip.10229.

引用本文的文献

1
2,3-Diaminopropanols Obtained from d-Serine as Intermediates in the Synthesis of Protected 2,3-l-Diaminopropanoic Acid (l-Dap) Methyl Esters.由 d-丝氨酸得到的 2,3-二氨基丙醇作为保护的 2,3-l-二氨基丙酸甲酯合成中的中间体。
Molecules. 2020 Mar 13;25(6):1313. doi: 10.3390/molecules25061313.
2
Peptide dendrimer/lipid hybrid systems are efficient DNA transfection reagents: structure--activity relationships highlight the role of charge distribution across dendrimer generations.肽树状大分子/脂质混合系统是高效的 DNA 转染试剂:结构-活性关系突出了树突状大分子代际间电荷分布的作用。
ACS Nano. 2013 May 28;7(5):4668-82. doi: 10.1021/nn400343z. Epub 2013 May 17.