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最大活性状态下酶促反应的动力学参数;一种进化方法。

Kinetic parameters of enzymatic reactions in states of maximal activity; an evolutionary approach.

作者信息

Heinrich R, Hoffmann E

机构信息

Humboldt-Universität zu Berlin, Fachbereich Biologie, Institut für Biophysik, Berlin, Germany.

出版信息

J Theor Biol. 1991 Jul 21;151(2):249-83. doi: 10.1016/s0022-5193(05)80363-7.

DOI:10.1016/s0022-5193(05)80363-7
PMID:1943142
Abstract

A theoretical investigation is presented which allows the calculation of states of maximal reaction rates for single enzymes and for unbranched enzymatic chains. As an extension to previous papers (Heinrich & Holzhütter, 1985, Biomed. biochim. Acta 44, 959-969; Heinrich et al., 1987, Bull. math. Biol. 49, 539-595) a detailed enzymatic mechanism was taken into consideration. Conclusions are drawn for the optimal values of the microscopic rate constants as well as of the maximal activities and Michaelis constants. Ten solutions are found which depend on the equilibrium constant as well as on the concentrations of substrates and products. It is shown that for high equilibrium constants one of the solutions applies to a very large range of the concentrations of the outer reactants. This solution is characterized by maximal values of the rate constants of all forward reactions and by non-maximal values of the rate constants of all backward reactions. In contrast to previous assumptions (Albery & Knowles, 1976b, Biochemistry 15, 5631-5640; Burbaum et al., 1989, Biochemistry 28, 9293-9305) states of maximal reaction rate are not always characterized by the highest possible values of the second-order rate constants which are related to the diffusion of the substrate and the product to the active site of the enzyme. Predictions are made concerning the ratios of maximal activities in optimal states as well as for the adaptation of the Michaelis constants to the concentrations of the outer reactants. Using metabolic control analysis it is shown that the solutions obtained for single enzymes may also be applied in multi-enzyme systems.

摘要

本文提出了一项理论研究,该研究能够计算单个酶以及无分支酶链的最大反应速率状态。作为对先前论文(Heinrich和Holzhütter,1985年,《生物医学与生物化学学报》44卷,959 - 969页;Heinrich等人,1987年,《数学生物学通报》49卷,539 - 595页)的扩展,考虑了详细的酶促机制。得出了微观速率常数以及最大活性和米氏常数的最优值。发现了十种取决于平衡常数以及底物和产物浓度的解。结果表明,对于高平衡常数,其中一种解适用于非常大范围的外部反应物浓度。该解的特征是所有正向反应的速率常数取最大值,而所有逆向反应的速率常数取非最大值。与先前的假设(Albery和Knowles,1976b年,《生物化学》15卷,5631 - 5640页;Burbaum等人,1989年,《生物化学》28卷,9293 - 9305页)相反,最大反应速率状态并不总是由与底物和产物扩散到酶活性位点相关的二阶速率常数的最高可能值来表征。对最优状态下最大活性的比率以及米氏常数与外部反应物浓度的适配性做出了预测。使用代谢控制分析表明,单个酶得到的解也可应用于多酶系统。

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1
Kinetic parameters of enzymatic reactions in states of maximal activity; an evolutionary approach.最大活性状态下酶促反应的动力学参数;一种进化方法。
J Theor Biol. 1991 Jul 21;151(2):249-83. doi: 10.1016/s0022-5193(05)80363-7.
2
Control analysis of unbranched enzymatic chains in states of maximal activity.最大活性状态下无分支酶链的对照分析。
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Biomed Biochim Acta. 1990;49(8-9):891-902.
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Evolutionary optimization of enzyme kinetic parameters; effect of constraints.酶动力学参数的进化优化;约束条件的影响
J Theor Biol. 1994 Dec 7;171(3):309-23. doi: 10.1006/jtbi.1994.1234.
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Evolutionary optimization of the catalytic efficiency of enzymes.酶催化效率的进化优化
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An investigation of the relationships between rate and driving force in simple uncatalysed and enzyme-catalysed reactions with applications of the findings to chemiosmotic reactions.对简单的非催化反应和酶催化反应中速率与驱动力之间的关系进行研究,并将研究结果应用于化学渗透反应。
Biochem J. 1992 Apr 15;283 ( Pt 2)(Pt 2):541-52. doi: 10.1042/bj2830541.
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Why do many Michaelian enzymes exhibit an equilibrium constant close to unity for the interconversion of enzyme-bound substrate and product?为什么许多米氏酶对于酶结合底物和产物的相互转化表现出接近1的平衡常数?
Eur J Biochem. 1991 Feb 14;195(3):663-70. doi: 10.1111/j.1432-1033.1991.tb15751.x.
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Optimal kinetic design of enzymes in a linear metabolic pathway.线性代谢途径中酶的最佳动力学设计
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A new approach for determination of the selectively favoured kinetic design of enzyme reactions.一种用于确定酶反应选择性偏好动力学设计的新方法。
J Theor Biol. 1996 Nov 21;183(2):179-83. doi: 10.1006/jtbi.1996.0211.

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