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解纤维梭菌的纤维小体:新组分的鉴定及复合物间的协同作用

The cellulosomes from Clostridium cellulolyticum: identification of new components and synergies between complexes.

作者信息

Fendri Imen, Tardif Chantal, Fierobe Henri-Pierre, Lignon Sabrina, Valette Odile, Pagès Sandrine, Perret Stéphanie

机构信息

Laboratoire de Chimie Bactérienne, CNRS, UPR9043, IMM, Marseille, France.

出版信息

FEBS J. 2009 Jun;276(11):3076-86. doi: 10.1111/j.1742-4658.2009.07025.x. Epub 2009 Apr 22.

Abstract

Cellulosomes produced by Clostridium cellulolyticum grown on cellulose were purified and separated using anion-exchange chromatography. SDS/PAGE analysis of six fractions showed variations in their cellulosomal protein composition. Hydrolytic activity on carboxymethyl cellulose, xylan, crystalline cellulose and hatched straw differed from one fraction to another. Fraction F1 showed a high level of activity on xylan, whereas fractions F5 and F6 were most active on crystalline cellulose and carboxymethyl cellulose, respectively. Several cellulosomal components specific to fractions F1, F5 and F6 were investigated using MS analysis. Several hemicellulases were identified, including three xylanases in F1, and several cellulases belonging to glycoside hydrolase families 9 and 5 and, a cystein protease inhibitor were identified in F5 and F6. Synergies were observed when two or three fractions were combined. A mixture containing fractions F1, F3 and F6 showed the most divergent cellulosomal composition, the most synergistic effects and the highest level of activity on straw (the most heterogeneous substrate tested). These findings show that on complex substrates such as straw, synergies occur between differently composed cellulosomes and the degradation efficiency of the cellulosomes is correlated with their enzyme diversity.

摘要

对在纤维素上生长的解纤维梭菌产生的纤维小体进行纯化,并使用阴离子交换色谱法进行分离。对六个组分进行的SDS/PAGE分析表明,它们的纤维小体蛋白质组成存在差异。各组分对羧甲基纤维素、木聚糖、结晶纤维素和切碎秸秆的水解活性各不相同。组分F1对木聚糖表现出高水平的活性,而组分F5和F6分别对结晶纤维素和羧甲基纤维素最具活性。使用质谱分析研究了组分F1、F5和F6特有的几种纤维小体成分。鉴定出了几种半纤维素酶,包括F1中的三种木聚糖酶,以及在F5和F6中鉴定出的几种属于糖苷水解酶家族9和5的纤维素酶,还有一种半胱氨酸蛋白酶抑制剂。当将两个或三个组分组合时观察到了协同作用。含有组分F1、F3和F6的混合物显示出最不同的纤维小体组成、最协同的效应以及对秸秆(所测试的最复杂底物)的最高活性水平。这些发现表明,在诸如秸秆这样的复杂底物上,不同组成的纤维小体之间会发生协同作用,并且纤维小体的降解效率与其酶的多样性相关。

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