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mRNA localization: gene expression in the spatial dimension.mRNA定位:空间维度上的基因表达。
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An RNA code for the FOX2 splicing regulator revealed by mapping RNA-protein interactions in stem cells.通过绘制干细胞中的RNA-蛋白质相互作用图谱揭示的FOX2剪接调节因子的RNA编码
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Diverse RNA-binding proteins interact with functionally related sets of RNAs, suggesting an extensive regulatory system.多种RNA结合蛋白与功能相关的RNA集合相互作用,提示存在一个广泛的调控系统。
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In vivo imaging of oskar mRNA transport reveals the mechanism of posterior localization.对osk基因信使核糖核酸转运的体内成像揭示了其在细胞后部定位的机制。
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Mechanisms and cellular roles of local protein synthesis in mammalian cells.哺乳动物细胞中局部蛋白质合成的机制及细胞作用
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Global analysis of mRNA localization reveals a prominent role in organizing cellular architecture and function.mRNA定位的全局分析揭示了其在构建细胞结构和功能方面的重要作用。
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3'-UTR SIRF: a database for identifying clusters of whort interspersed repeats in 3' untranslated regions.3'-UTR SIRF:一个用于识别3'非翻译区中短散布重复序列簇的数据库。
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真菌RNA结合蛋白Rrm4介导ubi1和rho3 mRNA的长距离运输。

The fungal RNA-binding protein Rrm4 mediates long-distance transport of ubi1 and rho3 mRNAs.

作者信息

König Julian, Baumann Sebastian, Koepke Janine, Pohlmann Thomas, Zarnack Kathi, Feldbrügge Michael

机构信息

Department of Organismic Interactions, Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.

出版信息

EMBO J. 2009 Jul 8;28(13):1855-66. doi: 10.1038/emboj.2009.145. Epub 2009 Jun 4.

DOI:10.1038/emboj.2009.145
PMID:19494833
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2711182/
Abstract

Cytoskeletal transport promotes polar growth in filamentous fungi. In Ustilago maydis, the RNA-binding protein Rrm4 shuttles along microtubules and is crucial for polarity in infectious filaments. Mutations in the RNA-binding domain cause loss of function. However, it was unclear which RNAs are bound and transported. Here, we applied in vivo RNA binding studies and live imaging to determine the molecular function of Rrm4. This new combination revealed that Rrm4 mediates microtubule-dependent transport of distinct mRNAs encoding, for example, the ubiquitin fusion protein Ubi1 and the small G protein Rho3. These transcripts accumulate in ribonucleoprotein particles (mRNPs) that move bidirectionally along microtubules and co-localise with Rrm4. Importantly, the 3' untranslated region of ubi1 containing a CA-rich binding site functions as zipcode during mRNA transport. Furthermore, motile mRNPs are not formed when the RNA-binding domain of Rrm4 is deleted, although the protein is still shuttling. Thus, Rrm4 constitutes an integral component of the transport machinery. We propose that microtubule-dependent mRNP trafficking is crucial for hyphal growth introducing U. maydis as attractive model for studying mRNA transport in higher eukaryotes.

摘要

细胞骨架运输促进丝状真菌的极性生长。在玉米黑粉菌中,RNA结合蛋白Rrm4沿着微管穿梭,对感染丝的极性至关重要。RNA结合结构域中的突变会导致功能丧失。然而,尚不清楚哪些RNA被结合和运输。在这里,我们应用体内RNA结合研究和实时成像来确定Rrm4的分子功能。这种新的组合揭示了Rrm4介导了不同mRNA的微管依赖性运输,这些mRNA编码例如泛素融合蛋白Ubi1和小G蛋白Rho3。这些转录本积聚在核糖核蛋白颗粒(mRNP)中,mRNP沿着微管双向移动并与Rrm4共定位。重要的是,含有富含CA结合位点的ubi1的3'非翻译区在mRNA运输过程中起邮政编码的作用。此外,当Rrm4的RNA结合结构域被删除时,尽管蛋白质仍在穿梭,但不会形成移动的mRNP。因此,Rrm4构成了运输机制的一个组成部分。我们提出,微管依赖性mRNP运输对于菌丝生长至关重要,这使玉米黑粉菌成为研究高等真核生物中mRNA运输的有吸引力的模型。