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基于微型模式番茄“米克尔”的番茄功能基因组学综合资源

Comprehensive resources for tomato functional genomics based on the miniature model tomato micro-tom.

机构信息

Graduate School of Life and Environmental Sciences, University of Tsukuba, Tennoudai, Tsukuba, 305-8572, Japan.

出版信息

Curr Genomics. 2008 Nov;9(7):436-43. doi: 10.2174/138920208786241225.

Abstract

Tomato (Solanum lycopersicum L., Solanaceae) is an excellent model plant for genomic research of solanaceous plants, as well as for studying the development, ripening, and metabolism of fruit. In 2003, the International Solanaceae Project (SOL, www.sgn.cornell.edu ) was initiated by members from more than 30 countries, and the tomato genome-sequencing project is currently underway. Genome sequence of tomato obtained by this project will provide a firm foundation for forthcoming genomic studies such as the comparative analysis of genes conserved among the Solanaceae species and the elucidation of the functions of unknown tomato genes. To exploit the wealth of the genome sequence information, there is an urgent need for novel resources and analytical tools for tomato functional genomics. Here, we present an overview of the development of genetic and genomic resources of tomato in the last decade, with a special focus on the activities of Japan SOL and the National Bio-Resource Project in the development of functional genomic resources of a model cultivar, Micro-Tom.

摘要

番茄(Solanum lycopersicum L.,茄科)是茄科植物基因组研究以及果实发育、成熟和代谢研究的理想模式植物。2003 年,由来自 30 多个国家的成员发起了国际茄科植物项目(SOL,www.sgn.cornell.edu),目前正在进行番茄基因组测序项目。该项目获得的番茄基因组序列将为即将到来的基因组研究提供坚实的基础,例如茄科物种之间保守基因的比较分析和番茄未知基因功能的阐明。为了利用基因组序列信息的丰富性,迫切需要新型的番茄功能基因组资源和分析工具。本文概述了过去十年中番茄遗传和基因组资源的发展情况,特别关注了日本 SOL 和国家生物资源项目在模式品种 Micro-Tom 的功能基因组资源开发方面的活动。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b55e/2691670/2b185b9c7d44/CG-9-436_F1.jpg

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