Pal Prodipto, Xi Huifeng, Guha Saurav, Sun Guangyun, Helfand Brian T, Meeks Joshua J, Suarez Brian K, Catalona William J, Deka Ranjan
Department of Environmental Health, Center for Genome Information, University of Cincinnati Medical Center, Cincinnati, Ohio 45267-0056, USA.
Prostate. 2009 Oct 1;69(14):1548-56. doi: 10.1002/pros.20999.
Recent whole genome association studies have independently identified multiple prostate cancer (PC) risk variants on 8q24. We have evaluated association of common variants in this region with PC susceptibility and tumor aggressiveness in a sample of European American men.
Forty-nine tagging SNPs including three previously reported significant variants (rs1447295, rs6983267, rs16901979) and seven variants in the 5' upstream region of the MYC proto-oncogene were tested for association with susceptibility to PC and tumor aggressiveness in 596 histologically verified PC cases and 567 ethnically matched controls.
Significant associations with susceptibility to PC were found at 17 SNPs, four of which (rs1016342, rs1378897, rs871135, and rs6470517) remained significant after adjusting for multiple corrections. One of the associated SNPs, rs871135, is located in the putative gene POU5F1P1 within the 8q24 region. An in slico analysis showed that the associated variant of this SNP alters a transcription factor implicating a plausible regulatory role. Additionally, one of the significantly associated SNPs, rs6470517, with PC susceptibility showed a significant over-representation of the G allele in cases with aggressive tumor.
Although this study does not directly confirm associations of the three specific SNPs (cited above), it corroborates reported signals of association in 8q24 reaffirming that genetic variation on 8q24 influences susceptibility to PC in men of European ancestry. Although our study did not confirm the allelic association of rs1447295, meta-analysis of this SNP provided support to previous reported associations. Further, this study implicates the 8q24 region with aggressive forms of PC.
近期的全基因组关联研究已独立鉴定出8q24上的多个前列腺癌(PC)风险变异。我们在一组欧美男性样本中评估了该区域常见变异与PC易感性及肿瘤侵袭性的关联。
对49个标签单核苷酸多态性(SNP)进行检测,其中包括3个先前报道的显著变异(rs1447295、rs6983267、rs16901979)以及MYC原癌基因5'上游区域的7个变异,以研究其与596例经组织学证实的PC病例及567例种族匹配对照的PC易感性和肿瘤侵袭性的关联。
在17个SNP处发现了与PC易感性的显著关联,其中4个(rs1016342、rs1378897、rs871135和rs6470517)在进行多重校正后仍具有显著意义。其中一个相关SNP,rs871135,位于8q24区域内的假定基因POU5F1P1中。一项硅基分析表明,该SNP的相关变异改变了一种转录因子,暗示了一种可能的调控作用。此外,一个与PC易感性显著相关的SNP,rs6470517,在侵袭性肿瘤病例中G等位基因的比例显著过高。
尽管本研究未直接证实上述3个特定SNP的关联,但它证实了8q24中报道的关联信号,再次确认8q24上的遗传变异影响欧洲血统男性对PC的易感性。尽管我们的研究未证实rs1447295的等位基因关联,但该SNP的荟萃分析为先前报道的关联提供了支持。此外,本研究表明8q24区域与侵袭性PC形式有关。