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乙型肝炎病毒全长基因组的系统发育分析揭示了比利时发生大规模医院感染暴发的证据。

Phylogenetic analysis of hepatitis B virus full-length genomes reveals evidence for a large nosocomial outbreak in Belgium.

作者信息

Pourkarim Mahmoud Reza, Verbeeck Jannick, Rahman Mustafizur, Amini-Bavil-Olyaee Samad, Forier An-Marie, Lemey Philippe, Maes Piet, Van Ranst Marc

机构信息

Laboratory of Clinical Virology, Rega Institute for Medical Research, Leuven, Belgium.

出版信息

J Clin Virol. 2009 Sep;46(1):61-8. doi: 10.1016/j.jcv.2009.06.015. Epub 2009 Jul 16.

Abstract

BACKGROUND

Hepatitis B virus (HBV) is primarily transmitted from mother to child, by sexual contact, intravenous drug abuse, or unsafe health care-related injection practices. Despite increased safety efforts, nosocomial acquired hepatitis B infection remains problematic.

OBJECTIVES

A large HBV outbreak was investigated comprising 36 patients with acute HBV infection in a primary care physician's practice.

STUDY DESIGN

In a retrospective study (2003-2008), 36 serum samples from patients with acute HBV infection were collected. They had received several injections by the same physician at least 3 months before the onset of clinical symptoms. As a control group, sera were collected from HBV patients from other physicians from the same province. Full-length HBV genomes were amplified and were phylogenetically analysed.

RESULTS

HBV complete genomes of 32 patients were successfully amplified and sequenced, and clustered together with the reference genotype A, subgenotype A2 strains. We also analysed 26 control HBV genotype A samples. All 32 HBV strains from the patient group clustered in a monophyletic branch with a bootstrap value of 100, whereas the control samples branched separately in another clade. The genetic distance value showed small differences within the patients group, whereas the rate within the control group was seven times higher. These observations confirm that the source of transmission was clearly different in both groups.

CONCLUSION

Maximum likelihood analysis and genetic distance calculations based on the full-length genomes of HBV strains isolated from patients and controls provided strong evidence for a common nosocomial source of infection for all 32 patient cases.

摘要

背景

乙型肝炎病毒(HBV)主要通过母婴传播、性接触、静脉注射毒品或不安全的医疗相关注射行为传播。尽管加强了安全措施,但医院获得性乙型肝炎感染仍然是个问题。

目的

调查了一次大规模的HBV暴发,该暴发发生在一名初级保健医生的诊所,涉及36例急性HBV感染患者。

研究设计

在一项回顾性研究(2003 - 2008年)中,收集了36例急性HBV感染患者的血清样本。这些患者在临床症状出现前至少3个月由同一名医生进行了多次注射。作为对照组,从同一省份其他医生处的HBV患者中收集血清。对全长HBV基因组进行扩增并进行系统发育分析。

结果

成功扩增并测序了32例患者的HBV完整基因组,这些基因组与参考基因型A、亚基因型A2菌株聚集在一起。我们还分析了26个对照HBV基因型A样本。患者组的所有32株HBV菌株聚集在一个单系分支中,自展值为100,而对照样本在另一个分支中单独分支。遗传距离值显示患者组内差异较小,而对照组内的差异率高7倍。这些观察结果证实两组的传播来源明显不同。

结论

基于从患者和对照中分离出的HBV菌株全长基因组的最大似然分析和遗传距离计算,为所有32例患者病例的共同医院感染源提供了有力证据。

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