Chau Foo-Tim, Chan Hoi-Yan, Cheung Chui-Yee, Xu Cheng-Jian, Liang Yizeng, Kvalheim Olav M
State Key Laboratory of Chinese Medicine and Molecular Pharmacology, Shenzhen, PR China.
Anal Chem. 2009 Sep 1;81(17):7217-25. doi: 10.1021/ac900731z.
Using whole chromatographic profiles and measurements of total bioactivity as input, a quantitative pattern-activity relationship (QPAR) approach is proposed as a general method for providing two pieces of crucial information about complex bioactive mixtures available: (i) a model for predicting total bioactivity from the chromatographic fingerprint and (ii) the features in the chromatographic profile responsible for the bioactivity. While the first piece of information is already available through existing approaches, the second one results from our ability to remove dominant features in the chromatographic fingerprints which mask the components specifically related to pharmacological activity. Our targeted approach makes information about bioactivity available at the molecular level and provides possibilities for assessment of herbal medicine (HM) possible beyond just authentication and total bioactivity. As an example, the antioxidant property of the HM Radix Puerariae lobatae is measured through its reducing power toward a ferric ion complex. A partial least-squares (PLS) model is created to predict the antioxidant activity from the chromatographic fingerprint. Using the antioxidant activity as a target, the most discriminatory projection in the multivariate space spanned by the chromatographic profiles is revealed. From this target-projected component, the chromatographic regions most strongly connected to antioxidant activity are identified using the so-called selectivity ratio (SR) plot. The results are validated by prediction of samples not included in the modeling step.
以完整的色谱图和总生物活性测量值作为输入,提出了一种定量模式-活性关系(QPAR)方法,作为一种通用方法来提供有关复杂生物活性混合物的两条关键信息:(i)一个从色谱指纹图谱预测总生物活性的模型,以及(ii)色谱图中负责生物活性的特征。虽然第一条信息已经可以通过现有方法获得,但第二条信息源于我们去除色谱指纹图谱中掩盖与药理活性特别相关成分的主要特征的能力。我们的靶向方法在分子水平上提供了有关生物活性的信息,并为评估草药(HM)提供了可能性,而不仅仅是鉴定和总生物活性。例如,通过其对铁离子络合物的还原能力来测量草药葛根的抗氧化特性。创建了一个偏最小二乘(PLS)模型,以从色谱指纹图谱预测抗氧化活性。以抗氧化活性为目标,揭示了色谱图在多元空间中最具区分性的投影。从这个目标投影成分中,使用所谓的选择性比(SR)图确定与抗氧化活性联系最紧密的色谱区域。通过对建模步骤中未包含的样品进行预测来验证结果。