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利用固态R 1rho实验监测构象动力学。

Monitoring conformational dynamics with solid-state R 1rho experiments.

作者信息

Quinn Caitlin M, McDermott Ann E

机构信息

Department of Chemistry, Columbia University, 3000 Broadway, New York, NY 10027, USA.

出版信息

J Biomol NMR. 2009 Sep;45(1-2):5-8. doi: 10.1007/s10858-009-9346-7. Epub 2009 Jul 28.

Abstract

A new application of solid-state rotating frame (R(1rho)) relaxation experiments to observe conformational dynamics is presented. Studies on a model compound, dimethyl sulfone (DMS), show that R(1rho) relaxation due to reorientation of a chemical shift anisotropy (CSA) tensor undergoing chemical exchange can be used to monitor slow-to-intermediate timescale conformational exchange processes. Control experiments used d ( 6 ) -DMS and alanine to confirm that the technique is monitoring reorientation of the CSA tensor rather than dipolar interactions or methyl group rotation. The application of this method to proteins could represent a new site-specific probe of conformational dynamics.

摘要

本文介绍了固态旋转框架(R(1rho))弛豫实验在观察构象动力学方面的一种新应用。对模型化合物二甲基砜(DMS)的研究表明,由于经历化学交换的化学位移各向异性(CSA)张量的重新取向而导致的R(1rho)弛豫,可用于监测从慢到中等时间尺度的构象交换过程。使用d(6)-DMS和丙氨酸进行的对照实验证实,该技术监测的是CSA张量的重新取向,而非偶极相互作用或甲基旋转。将该方法应用于蛋白质可能代表一种新的构象动力学位点特异性探针。

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