G. K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences and Pushchino State University, Pushchino, Moscow region, 142290, Russia.
Institute of Biochemical Engineering, Technische Universität Braunschweig, 38106, Germany.
Int J Syst Evol Microbiol. 2010 May;60(Pt 5):1044-1051. doi: 10.1099/ijs.0.003152-0. Epub 2009 Aug 7.
Two previously isolated strains (DSM 9103(T) and LPM-4(T)) able to grow with EDTA (facultatively and obligately, respectively) as the source of carbon, nitrogen and energy were investigated in order to clarify their taxonomic positions. The strains were strictly aerobic, Gram-negative, asporogenous and non-motile rods that required biotin for growth. Reproduction occurred by binary fission. The strains were mesophilic and neutrophilic. Their major fatty acids were summed feature 7 (consisting of C(18 : 1)omega7c, C(18 : 1)omega9t and/or C(18 : 1)omega12t) and C(19 : 0) cyclo omega8c. The polyamine pattern revealed homospermidine as a major polyamine. Predominant polar lipids were phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine, phosphatidyldimethylethanolamine, phosphatidylmonomethylethanolamine and diphosphatidylglycerol. Mesorhizobium-specific ornithine lipid was absent. The predominant isoprenoid quinone was Q-10. The DNA G+C values were 60.8 and 63.1 mol% (T(m)) for strains LPM-4(T) and DSM 9103(T), respectively. The level of 16S rRNA gene sequence similarity between these EDTA-utilizers was 99.3 % while the DNA-DNA hybridization value was only 37 %. Both strains were phylogenetically related to members of the genera Aminobacter and Mesorhizobium (95-97 % sequence similarity). However, DNA-DNA hybridization values between the novel EDTA-degrading strains and Aminobacter aminovorans DSM 7048(T) and Mesorhizobium loti DSM 2626(T) were low (10-11 %). Based on their genomic and phenotypic properties, the new alphaproteobacterial strains are assigned to a novel genus, Chelativorans gen. nov., with the names Chelativorans multitrophicus sp. nov. (type strain DSM 9103(T)=VKM B-2394(T)) and Chelativorans oligotrophicus sp. nov. (type strain LPM-4(T)=VKM B-2395(T)=DSM 19276(T)).
为了澄清其分类地位,研究了两株先前分离的菌株(DSM 9103(T) 和 LPM-4(T)),它们能够分别以 EDTA( facultatively 和 obligately)作为碳、氮和能源的来源进行生长。这些菌株是严格需氧的革兰氏阴性无孢子的非运动棒状细菌,生长需要生物素。繁殖通过二分分裂发生。这些菌株是中温的兼性嗜中性的。它们的主要脂肪酸是总和特征 7(由 C(18:1)omega7c、C(18:1)omega9t 和/或 C(18:1)omega12t 和 C(19:0)环 omega8c 组成)和 C(19:0)环 omega8c。多胺图谱显示腐胺是主要的多胺。主要的极性脂是磷脂酰胆碱、磷脂酰甘油、磷脂酰乙醇胺、磷脂酰二甲乙醇胺、磷脂酰单乙醇胺和双磷脂酰甘油。Mesorhizobium 特异性鸟氨酸脂不存在。主要的异戊二烯醌是 Q-10。LPM-4(T)和 DSM 9103(T)的 DNA G+C 值分别为 60.8 和 63.1 mol%(T(m))。这些 EDTA 利用菌之间的 16S rRNA 基因序列相似性水平为 99.3%,而 DNA-DNA 杂交值仅为 37%。两个菌株都与 Aminobacter 和 Mesorhizobium 属的成员密切相关(95-97%的序列相似性)。然而,新型 EDTA 降解菌株与 Aminobacter aminovorans DSM 7048(T)和 Mesorhizobium loti DSM 2626(T)之间的 DNA-DNA 杂交值较低(10-11%)。基于其基因组和表型特性,新的 alpha 变形菌菌株被分配到一个新属,Chelativorans 属,新名称 Chelativorans multitrophicus sp. nov.(模式菌株 DSM 9103(T)=VKM B-2394(T))和 Chelativorans oligotrophicus sp. nov.(模式菌株 LPM-4(T)=VKM B-2395(T)=DSM 19276(T))。