Hwang Chung Yeon, Cho Byung Cheol
School of Earth and Environmental Sciences and Research Institute of Oceanography, Seoul National University, Shillim-dong, Kwanak-gu, Seoul 151-742, Republic of Korea.
Int J Syst Evol Microbiol. 2008 Jan;58(Pt 1):267-77. doi: 10.1099/ijs.0.65016-0.
Two novel Gram-negative bacterial strains, designated CL-GR15(T) and CL-GR35, were isolated from coastal seawater of the east coast of Korea. Identical 16S rRNA gene sequences were found in the two strains, and it was found that the strains represented a distinct and deep evolutionary lineage of descent in the order Rhizobiales, and clustered with yet-uncultured marine bacteria. This lineage could not be associated with any of 12 known families in the order Rhizobiales. The most closely related established genus was Ochrobactrum (90.7-92.5% sequence similarity) in the family Brucellaceae. Cells of the strains were facultatively anaerobic, weakly motile rods which occasionally exhibited cohesion with each other. The strains were catalase-, oxidase- and gelatinase-positive, and accumulated intracellular poly-beta-hydroxybutyrate granules. Ubiquinone 10 was the major quinone. The major polar lipids comprised phosphatidylcholine, phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylmonomethylethanolamine, an unidentified aminolipid and an unidentified glycolipid. The cellular fatty acids mainly consisted of C(18:1)omega7c, summed feature 3 (C(15:0) iso 2-OH and/or C(16:1)omega7c) and C(20:1)omega7c. The DNA G+C content was 52.8-53.0 mol%. DNA-DNA hybridization experiments revealed high values (>97%) for relatedness between strains CL-GR15(T) and CL-GR35 and suggested that these two strains constituted a single species. The distinct phylogenetic position and combinations of genotypic, phenotypic and chemotaxonomic characteristics support the proposal of Cohaesibacter gen. nov., with the type species Cohaesibacter gelatinilyticus sp. nov. (type strain, CL-GR15(T)=KCCM 42319(T)=DSM 18289(T)). Cohaesibacteraceae fam. nov. is also proposed.
从韩国东海岸的沿海海水中分离出两株新的革兰氏阴性细菌菌株,分别命名为CL-GR15(T)和CL-GR35。在这两株菌株中发现了相同的16S rRNA基因序列,并且发现这些菌株在根瘤菌目中代表了一个独特且进化分支较深的谱系,与未培养的海洋细菌聚集在一起。该谱系与根瘤菌目中12个已知科中的任何一科均无关联。最密切相关的已确定属是布鲁氏菌科中的慢生根瘤菌属(序列相似性为90.7-92.5%)。这些菌株的细胞为兼性厌氧、运动较弱的杆菌,偶尔彼此表现出凝聚性。这些菌株过氧化氢酶、氧化酶和明胶酶呈阳性,并积累细胞内聚-β-羟基丁酸酯颗粒。泛醌10是主要醌类。主要极性脂类包括磷脂酰胆碱、磷脂酰甘油、二磷脂酰甘油、磷脂酰乙醇胺、磷脂酰单甲基乙醇胺、一种未鉴定的氨基脂和一种未鉴定的糖脂。细胞脂肪酸主要由C(18:1)ω7c、总和特征3(C(15:0)异2-OH和/或C(16:1)ω7c)和C(20:1)ω7c组成。DNA G+C含量为52.8-53.0 mol%。DNA-DNA杂交实验显示菌株CL-GR15(T)和CL-GR35之间的相关性很高(>97%),表明这两个菌株构成一个单一物种。独特的系统发育位置以及基因型、表型和化学分类特征的组合支持了新属凝聚杆菌属(Cohaesibacter gen. nov.)的提议,其模式种为溶明胶凝聚杆菌(Cohaesibacter gelatinilyticus sp. nov.)(模式菌株,CL-GR15(T)=KCCM 42319(T)=DSM 18289(T))。还提议了新科凝聚杆菌科(Cohaesibacteraceae fam. nov.)。