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实验室调查与系统发生分析在 2007 年夏季希腊无菌性脑膜炎爆发中涉及的肠病毒。

Laboratory investigation and phylogenetic analysis of enteroviruses involved in an aseptic meningitis outbreak in Greece during the summer of 2007.

机构信息

National Enterovirus/Poliovirus Reference Laboratory, Hellenic Pasteur Institute, Vas. Sofias 127, 11521, Athens, Greece.

出版信息

J Clin Virol. 2009 Nov;46(3):270-4. doi: 10.1016/j.jcv.2009.07.019. Epub 2009 Aug 20.

DOI:10.1016/j.jcv.2009.07.019
PMID:19699142
Abstract

BACKGROUND

Aseptic meningitis is the most commonly observed CNS infection and is mainly attributed to Non-Polio Enteroviruses (EV).

OBJECTIVE

Identification and genetic analysis of the EV involved in the recent aseptic meningitis outbreak which occurred in Greece, during the summer of 2007.

STUDY DESIGN

In total, 213 CSF and faecal samples were examined for EV presence by culture, while enteroviral RNA detection was performed by nucleic acid sequence-based amplification assay (NASBA). EV strains were typed by seroneutralization, as well as nested RT-PCR followed by VP1-2A gene partial sequencing. Phylogenetic analysis was carried out for the identification of the genetic relatedness among the isolated EV strains.

RESULTS

EV detection rate in CSF and faecal samples was 43.9% and 70.8%, respectively. EV serotyping and VP1 region analysis revealed the predominance of echovirus 4 (ECV4) serotype and the circulation of ECV6, 9, 14, 25, Coxsackie A6, A15, A24 and Coxsackie B1 serotypes. All ECV4 isolates presented a 98.7% similarity in nucleotide sequence, with a Spanish ECV4 strain, isolated during a meningitis outbreak in 2006.

CONCLUSIONS

It is the first time that ECV4 is associated with an aseptic meningitis outbreak in Greece, during which 9 different EV serotypes were co-circulating. All Greek ECV4 isolates were closely related to the Spanish ECV4 strain. Genetic analysis of the VP1 gene can significantly contribute to the revelation of the endemic EV strains circulation pattern and their phylogenetic relationship with enteroviruses involved in epidemics of distant geographical areas at different time periods.

摘要

背景

无菌性脑膜炎是最常见的中枢神经系统感染,主要由非脊髓灰质炎肠道病毒(EV)引起。

目的

鉴定并分析 2007 年夏季希腊发生的无菌性脑膜炎暴发中涉及的肠道病毒。

研究设计

共检测了 213 份 CSF 和粪便样本,通过培养法检测 EV 存在情况,通过核酸序列扩增检测法(NASBA)检测肠道病毒 RNA。通过血清中和试验以及巢式 RT-PCR 后 VP1-2A 基因部分测序对 EV 株进行分型。对分离的 EV 株进行系统发育分析,以鉴定其遗传相关性。

结果

CSF 和粪便样本中 EV 的检出率分别为 43.9%和 70.8%。EV 血清分型和 VP1 区分析显示,柯萨奇病毒 4(Echo 4,ECV4)血清型占主导地位,同时循环存在 ECV6、9、14、25、A6、A15、A24 和 B1 血清型。所有 ECV4 分离株核苷酸序列相似度为 98.7%,与 2006 年脑膜炎暴发期间分离的一株西班牙 ECV4 株高度相似。

结论

这是希腊首次将 ECV4 与无菌性脑膜炎暴发相关联,在此期间共循环存在 9 种不同的肠道病毒血清型。所有希腊 ECV4 分离株与西班牙 ECV4 株密切相关。VP1 基因的遗传分析可显著揭示地方性 EV 株的流行模式及其与不同地理区域不同时期流行的肠道病毒之间的系统发育关系。

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