• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于分子数据推断墨西哥中部阿尔甘西属(鲇形目:鲤科)的系统发育关系和生物地理学

Phylogenetic relationships and biogeography of the genus Algansea Girard (Cypriniformes: Cyprinidae) of central Mexico inferred from molecular data.

作者信息

Pérez-Rodríguez Rodolfo, Domínguez-Domínguez Omar, Pérez Ponce de León Gerardo, Doadrio Ignacio

机构信息

Posgrado en Ciencias Biológicas, Instituto de Biología, Universidad Nacional Autónoma de México, México, D.F., México.

出版信息

BMC Evol Biol. 2009 Sep 7;9:223. doi: 10.1186/1471-2148-9-223.

DOI:10.1186/1471-2148-9-223
PMID:19735558
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2759940/
Abstract

BACKGROUND

The genus Algansea is one of the most representative freshwater fish groups in central Mexico due to its wide geographic distribution and unusual level of endemicity. Despite the small number of species, this genus has had an unsettled taxonomic history due to high levels of intraspecific morphological variation. Moreover, several phylogenetic hypotheses among congeners have been proposed but have had the following shortcomings: the use of homoplasious morphological characters, the use of character codification and polarisation methods that lacked objectivity, and incomplete taxonomic sampling. In this study, a phylogenetic analysis among species of Algansea is presented. This analysis is based upon two molecular markers, the mitochondrial gene cytochrome b and the first intron of the ribosomal protein S7 gene.

RESULTS

Bayesian analysis based on a combined matrix (cytochrome b and first intron S7) showed that Algansea is a monophyletic group and that Agosia chrysogaster is the sister group. Divergence times dated the origin of the genus around 16.6 MYA, with subsequent cladogenetic events occurring between 6.4 and 2.8 MYA. When mapped onto the molecular phylogenetic hypothesis, the character states of three morphological characters did not support previous hypotheses on the evolution of morphological traits in the genus Algansea, whereas the character states of the remaining six characters partially corroborated those hypotheses.

CONCLUSION

Monophyly of the genus Algansea was corroborated in this study. Tree topology shows the genus consists of three main lineages: Central-Eastern, Western, and Southern clades. However, the relationships among these clades remained unresolved. Congruence found between the available geological and climatic history and the divergence times made it possible to infer the biogeographical history of Algansea, which suggested that vicariance events were responsible for the evolutionary history of the genus. Interestingly, this pattern was shared with other members of the freshwater fish fauna of central Mexico. In addition, molecular data also show that some morphological traits alleged to represent synapomorphies in previous studies were actually homoplasies. Others traits were corroborated as synapomorphies, particularly in those species of a subgroup corresponding with the Central-Eastern clade within Algansea; this corroboration is interpreted as a result of evolutionary adaptations.

摘要

背景

由于广泛的地理分布和独特的地方特有性水平,阿尔甘西属是墨西哥中部最具代表性的淡水鱼群体之一。尽管该属物种数量较少,但由于种内形态变异程度较高,其分类历史一直不稳定。此外,已经提出了几个关于同属物种间的系统发育假说,但存在以下缺点:使用了趋同的形态特征、使用了缺乏客观性的特征编码和极化方法,以及分类抽样不完整。在本研究中,对阿尔甘西属物种进行了系统发育分析。该分析基于两个分子标记,即线粒体细胞色素b基因和核糖体蛋白S7基因的第一个内含子。

结果

基于组合矩阵(细胞色素b和第一个内含子S7)的贝叶斯分析表明,阿尔甘西属是一个单系类群,金色阿戈西亚鱼是其姊妹类群。分歧时间表明该属起源于约1660万年前,随后在640万至280万年前发生了分支形成事件。当映射到分子系统发育假说上时,三个形态特征的特征状态不支持先前关于阿尔甘西属形态特征进化的假说,而其余六个特征的特征状态部分证实了这些假说。

结论

本研究证实了阿尔甘西属的单系性。树形拓扑结构表明该属由三个主要谱系组成:中东部、西部和南部支系。然而,这些支系之间的关系仍未解决。现有地质和气候历史与分歧时间之间的一致性使得推断阿尔甘西属的生物地理历史成为可能,这表明隔离事件是该属进化历史的原因。有趣的是,这种模式与墨西哥中部淡水鱼区系的其他成员相同。此外,分子数据还表明,先前研究中一些被认为代表共衍征的形态特征实际上是同形特征。其他特征被确认为共衍征,特别是在与阿尔甘西属中东部支系相对应的一个亚组的那些物种中;这种证实被解释为进化适应的结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7411/2759940/a8df2e73eb80/1471-2148-9-223-6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7411/2759940/62ab1cfb49db/1471-2148-9-223-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7411/2759940/18293a31b214/1471-2148-9-223-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7411/2759940/0f2a720cb005/1471-2148-9-223-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7411/2759940/1dd282265ae5/1471-2148-9-223-4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7411/2759940/c81e4307923b/1471-2148-9-223-5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7411/2759940/a8df2e73eb80/1471-2148-9-223-6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7411/2759940/62ab1cfb49db/1471-2148-9-223-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7411/2759940/18293a31b214/1471-2148-9-223-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7411/2759940/0f2a720cb005/1471-2148-9-223-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7411/2759940/1dd282265ae5/1471-2148-9-223-4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7411/2759940/c81e4307923b/1471-2148-9-223-5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7411/2759940/a8df2e73eb80/1471-2148-9-223-6.jpg

相似文献

1
Phylogenetic relationships and biogeography of the genus Algansea Girard (Cypriniformes: Cyprinidae) of central Mexico inferred from molecular data.基于分子数据推断墨西哥中部阿尔甘西属(鲇形目:鲤科)的系统发育关系和生物地理学
BMC Evol Biol. 2009 Sep 7;9:223. doi: 10.1186/1471-2148-9-223.
2
Genetic divergence and phylogenetic independence of Far Eastern species in subfamily Leuciscinae (Pisces: Cyprinidae) inferred from mitochondrial DNA analyses.基于线粒体DNA分析推断鲤科雅罗鱼亚科远东物种的遗传分化和系统发育独立性
Genes Genet Syst. 2007 Aug;82(4):329-40. doi: 10.1266/ggs.82.329.
3
Comparative historical biogeography of three groups of Nearctic freshwater fishes across central Mexico.墨西哥中部地区三组新北区淡水鱼类的比较历史生物地理学
J Fish Biol. 2015 Mar;86(3):993-1015. doi: 10.1111/jfb.12611. Epub 2015 Feb 3.
4
Molecular phylogeny of the freshwater fish family Cobitidae (Cypriniformes: Teleostei): delimitation of genera, mitochondrial introgression and evolution of sexual dimorphism.鳅科(鲤形目:硬骨鱼纲)淡水鱼的分子系统发育:属的界定、线粒体渐渗杂交及两性异形的演化
Mol Phylogenet Evol. 2008 May;47(2):812-31. doi: 10.1016/j.ympev.2007.12.018. Epub 2008 Jan 1.
5
Molecular phylogenetics of the family Cyprinidae (Actinopterygii: Cypriniformes) as evidenced by sequence variation in the first intron of S7 ribosomal protein-coding gene: further evidence from a nuclear gene of the systematic chaos in the family.鲤科(辐鳍鱼纲:鲤形目)的分子系统发育学:基于S7核糖体蛋白编码基因第一内含子序列变异的证据——来自该科系统混乱的一个核基因的进一步证据
Mol Phylogenet Evol. 2008 Mar;46(3):818-29. doi: 10.1016/j.ympev.2007.06.001. Epub 2007 Jun 16.
6
Phylogenetic relationships and biogeographical patterns in Circum-Mediterranean subfamily Leuciscinae (Teleostei, Cyprinidae) inferred from both mitochondrial and nuclear data.基于线粒体和核基因数据推断的环地中海副鲤科(鲤形目,鲤科)的系统发育关系和生物地理格局。
BMC Evol Biol. 2010 Aug 31;10:265. doi: 10.1186/1471-2148-10-265.
7
Phylogeny and biogeography of highly diverged freshwater fish species (Leuciscinae, Cyprinidae, Teleostei) inferred from mitochondrial genome analysis.基于线粒体基因组分析的高度分化淡水鱼类(Leuciscinae,Cyprinidae,Teleostei)的系统发育和生物地理学研究。
Gene. 2013 Feb 10;514(2):112-24. doi: 10.1016/j.gene.2012.10.019. Epub 2012 Nov 19.
8
Molecular evolution of southern North American Cyprinidae (Actinopterygii), with the description of the new genus Tampichthys from central Mexico.北美南部鲤科鱼类(辐鳍鱼纲)的分子进化,兼对来自墨西哥中部的新属坦皮鱼属的描述。
Mol Phylogenet Evol. 2008 May;47(2):729-56. doi: 10.1016/j.ympev.2007.11.036. Epub 2008 Feb 1.
9
Molecular systematics, phylogeny and biogeography of roaches (Rutilus, Teleostei, Cyprinidae).拟鲤(硬骨鱼纲,鲤科)的分子系统学、系统发育和生物地理学
Mol Phylogenet Evol. 2008 Oct;49(1):362-7. doi: 10.1016/j.ympev.2008.07.012. Epub 2008 Jul 23.
10
The world's smallest vertebrate species of the genus Paedocypris: a new family of freshwater fishes and the sister group to the world's most diverse clade of freshwater fishes (Teleostei: Cypriniformes).世界上最小的帕氏鱼属脊椎动物物种:一种新的淡水鱼类科,与世界上最多样化的淡水鱼类类群(硬骨鱼纲:鲤形目)为姐妹群。
Mol Phylogenet Evol. 2010 Oct;57(1):152-75. doi: 10.1016/j.ympev.2010.04.008. Epub 2010 Apr 14.

引用本文的文献

1
Phylogeography of the Mesa Silverside fish (Woolman, 1894) throughout the Mexican Plateau.墨西哥高原地区梅萨银汉鱼(Woolman,1894年)的系统发育地理学
PeerJ. 2024 Dec 12;12:e18256. doi: 10.7717/peerj.18256. eCollection 2024.
2
Multi-locus phylogeny of the catfish genus Ictalurus Rafinesque, 1820 (Actinopterygii, Siluriformes) and its systematic and evolutionary implications.鲶形目鲶科美洲拟鲿属鱼类的多基因系统发育及其系统学和进化意义
BMC Ecol Evol. 2023 Jun 28;23(1):27. doi: 10.1186/s12862-023-02134-w.
3
Genomic data support the taxonomic validity of Middle American livebearers Poeciliopsis gracilis and Poeciliopsis pleurospilus (Cyprinodontiformes: Poeciliidae).

本文引用的文献

1
REPRODUCTIVE ISOLATION AND INTROGRESSION BETWEEN NOTROPIS CORNUTUS AND NOTROPIS CHRYSOCEPHALUS (FAMILY CYPRINIDAE): COMPARISON OF MORPHOLOGY, ALLOZYMES, AND MITOCHONDRIAL DNA.角鼻无须魮和金黄头无须魮(鲤科)之间的生殖隔离与基因渐渗:形态学、等位酶和线粒体DNA的比较
Evolution. 1989 May;43(3):620-634. doi: 10.1111/j.1558-5646.1989.tb04257.x.
2
INFERRING PHYLOGENIES FROM mtDNA VARIATION: MITOCHONDRIAL-GENE TREES VERSUS NUCLEAR-GENE TREES.从线粒体DNA变异推断系统发育:线粒体基因树与核基因树
Evolution. 1995 Aug;49(4):718-726. doi: 10.1111/j.1558-5646.1995.tb02308.x.
3
Using supernetworks to distinguish hybridization from lineage-sorting.
基因组数据支持中美洲胎生鮈属 Poeciliopsis gracilis 和 Poeciliopsis pleurospilus(鲤形目:胎生鮈科)的分类学有效性。
PLoS One. 2022 Jan 31;17(1):e0262687. doi: 10.1371/journal.pone.0262687. eCollection 2022.
4
Regional patterns of genetic structure and environmental differentiation in willow populations ( Willd.) from Central Mexico.墨西哥中部柳树(柳属)种群的遗传结构和环境分化区域模式
Ecol Evol. 2019 Aug 2;9(17):9564-9579. doi: 10.1002/ece3.5475. eCollection 2019 Sep.
5
Genetic differentiation in the southern population of the Fathead Minnow Rafinesque (Actinopterygii: Cyprinidae).黑头软口鲦(辐鳍鱼纲:鲤科)南方种群的遗传分化
PeerJ. 2019 Apr 29;7:e6224. doi: 10.7717/peerj.6224. eCollection 2019.
6
A multilocus phylogeny of the fish genus : Solving taxonomic uncertainties and preliminary evidence of reticulation.鱼类属的多位点系统发育:解决分类学上的不确定性及网状进化的初步证据
Ecol Evol. 2019 Jan 25;9(4):1845-1857. doi: 10.1002/ece3.4874. eCollection 2019 Feb.
7
Evolving in the highlands: the case of the Neotropical Lerma live-bearing Poeciliopsis infans (Woolman, 1894) (Cyprinodontiformes: Poeciliidae) in Central Mexico.在高地演化:中美洲新热带产仔鱂属 Lerma 鱼类 Poeciliopsis infans (Woolman, 1894)(鲤形目:胎鱂科)的案例。
BMC Evol Biol. 2018 Apr 20;18(1):56. doi: 10.1186/s12862-018-1172-7.
8
Do the historical biogeography and evolutionary history of the digenean Margotrema spp. across central Mexico mirror those of their freshwater fish hosts (Goodeinae)?双盘吸虫Margotrema属物种在墨西哥中部的历史生物地理学和进化史是否与其淡水鱼宿主(古氏鱼亚科)的历史生物地理学和进化史相似?
PLoS One. 2014 Jul 7;9(7):e101700. doi: 10.1371/journal.pone.0101700. eCollection 2014.
9
Complex evolutionary history of the Mexican stoneroller Campostoma ornatum Girard, 1856 (Actinopterygii: Cyprinidae).墨西哥盲鱼 Campostoma ornatum Girard, 1856(硬骨鱼纲:鲤科)的复杂演化历史。
BMC Evol Biol. 2011 Jun 4;11:153. doi: 10.1186/1471-2148-11-153.
使用超网络区分杂交与谱系分选。
BMC Evol Biol. 2008 Jul 14;8:202. doi: 10.1186/1471-2148-8-202.
4
Evolutionary history of the endangered fish Zoogoneticus quitzeoensis (Bean, 1898) (Cyprinodontiformes: Goodeidae) using a sequential approach to phylogeography based on mitochondrial and nuclear DNA data.基于线粒体和核DNA数据,采用系统发育地理学的序列分析方法研究濒危鱼类奎氏精器鱼(Zoogoneticus quitzeoensis,Bean,1898)(鲤齿目:古氏鳉科)的进化历史。
BMC Evol Biol. 2008 May 26;8:161. doi: 10.1186/1471-2148-8-161.
5
Molecular evolution of southern North American Cyprinidae (Actinopterygii), with the description of the new genus Tampichthys from central Mexico.北美南部鲤科鱼类(辐鳍鱼纲)的分子进化,兼对来自墨西哥中部的新属坦皮鱼属的描述。
Mol Phylogenet Evol. 2008 May;47(2):729-56. doi: 10.1016/j.ympev.2007.11.036. Epub 2008 Feb 1.
6
Molecular phylogenetics of the family Cyprinidae (Actinopterygii: Cypriniformes) as evidenced by sequence variation in the first intron of S7 ribosomal protein-coding gene: further evidence from a nuclear gene of the systematic chaos in the family.鲤科(辐鳍鱼纲:鲤形目)的分子系统发育学:基于S7核糖体蛋白编码基因第一内含子序列变异的证据——来自该科系统混乱的一个核基因的进一步证据
Mol Phylogenet Evol. 2008 Mar;46(3):818-29. doi: 10.1016/j.ympev.2007.06.001. Epub 2007 Jun 16.
7
BEAST: Bayesian evolutionary analysis by sampling trees.BEAST:通过抽样树进行贝叶斯进化分析。
BMC Evol Biol. 2007 Nov 8;7:214. doi: 10.1186/1471-2148-7-214.
8
Conflicting phylogenetic signal of nuclear vs mitochondrial DNA markers in midwife toads (Anura, Discoglossidae, Alytes): deep coalescence or ancestral hybridization?产婆蟾(无尾目,盘舌蟾科,产婆蟾属)中核DNA与线粒体DNA标记的系统发育信号冲突:深度趋同还是祖先杂交?
Mol Phylogenet Evol. 2007 Jul;44(1):494-500. doi: 10.1016/j.ympev.2007.03.001. Epub 2007 Mar 12.
9
Re-examination and phylogeny of the genus Chondrostoma based on mitochondrial and nuclear data and the definition of 5 new genera.基于线粒体和核数据对软口鱼属的重新审视与系统发育研究以及5个新属的定义
Mol Phylogenet Evol. 2007 Feb;42(2):362-72. doi: 10.1016/j.ympev.2006.07.003. Epub 2006 Jul 20.
10
Multiple nuclear gene sequences identify phylogenetic species boundaries in the rapidly radiating clade of Mexican ambystomatid salamanders.多个核基因序列确定了墨西哥钝口螈快速辐射进化枝中的系统发育物种界限。
Mol Ecol. 2006 Aug;15(9):2489-503. doi: 10.1111/j.1365-294X.2006.02961.x.